Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 305 a.a., transcriptional activator of gcdH, LysR family from Pseudomonas putida KT2440

 Score =  224 bits (570), Expect = 2e-63
 Identities = 120/291 (41%), Positives = 166/291 (57%), Gaps = 1/291 (0%)

Query: 4   KRHLPSITALQCFEAATRHLSFTRAAEELNLTQSAVSKQVAQLEELLQHLLFRRVRRRLQ 63
           +R +PS  AL CFEAA R+ SFT+AA+EL LTQ AV +Q+  LE  L   LFRR RR ++
Sbjct: 2   RRKIPSTAALICFEAAARNESFTKAAQELALTQGAVCRQIGGLEAFLNVELFRRSRRGVR 61

Query: 64  MTPAGDLYLVEVRKILTQVEMSTHYLRSYGGETEVLRVSTPYTFGARWLVPRLKGWRLRH 123
           +T AG  Y  +V   L  VE  T  +    G   V+ ++   TFG +WL+PRLK ++ RH
Sbjct: 62  LTEAGLSYSRQVAAQLDAVERDTLSVMRQQG-ANVIELAVVPTFGTQWLLPRLKDFQQRH 120

Query: 124 PQIHLDLCNEQEPDELLQGKADMAFYFGQGSRPGTESQKLFSEELVPVCAPESLPAQPFT 183
           P++ ++L N   P        D A YFG     GT+S +L  E  VPVC+P  L  Q   
Sbjct: 121 PEVTVNLTNRTRPFLFADTTFDAAIYFGDADWSGTQSHQLMGENPVPVCSPALLNGQGML 180

Query: 184 APTQLSNLVLLQNASRPQGWHDWFASQGYQTEHSYHGPRFDTFYMCIRAAQVGCGVALLP 243
               ++ L LLQ ++RP  W  WF S G   E    GPR++ F M  +AA    G+AL+P
Sbjct: 181 EARHIAQLPLLQQSTRPYAWRQWFGSVGMNVERDMTGPRYELFSMLAQAAMHDMGIALIP 240

Query: 244 RFLVEEELADGKLVIPWQHAMPSEDAYYLAYPEHSAEVPKVREFVKWMMEQ 294
            FL++ EL +G+LV+  +HA+ S+ AYYL  PE   E   +R F  W++ Q
Sbjct: 241 PFLIQRELEEGRLVVANRHALSSDKAYYLMIPERKVESASLRAFRDWLVSQ 291