Pairwise Alignments

Query, 295 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 310 a.a., predicted inner membrane protein (NCBI) from Escherichia coli BW25113

 Score =  290 bits (742), Expect = 3e-83
 Identities = 148/269 (55%), Positives = 198/269 (73%), Gaps = 3/269 (1%)

Query: 19  DVDKNQ-PPRAAVLHEIIRTQGDQELERSVAALWWSALAAGLTMGLSLMAMGLLNSRLPE 77
           ++D+++ P RA  +HE IR  G++ELER   AL WSA+AAGL+MG SL+A G+    L  
Sbjct: 27  EIDEDRLPSRAMAIHEHIRQDGEKELERDAMALLWSAIAAGLSMGASLLAKGIFQVELEG 86

Query: 78  GEAFKVIASFGYCAGFLAVILARQQLFTENTLTAVLPVMSKPTLGNAGRLLRLWTVVLVG 137
                ++ + GY  GF+ VI+ARQQLFTENT+TAVLPVM KPT+ N G L+RLW VVL+G
Sbjct: 87  VPGSFLLENLGYTFGFIIVIMARQQLFTENTVTAVLPVMQKPTMSNVGLLIRLWGVVLLG 146

Query: 138 NLCGTLLVAYVMLHLPIFDTKTDLAFLEIGRKIMENDAGQMFAKGIISGWMIATMVWMIP 197
           N+ GT + A+   ++PIF+ +T  AF++IG  +M+N   +MFA  IISGW+IATMVWM P
Sbjct: 147 NILGTGIAAWAFEYMPIFNEETRDAFVKIGMDVMKNTPSEMFANAIISGWLIATMVWMFP 206

Query: 198 SMESAKMFIIILITYLMALGDFTHIVVGSAEVSYLVFAGELAWKDFWLVFAGPTLAGNII 257
           +  +AK+ +IIL+T+L+ALGD THIVVGS E+ YLVF G L W DF   FA PTLAGNI 
Sbjct: 207 AAGAAKIVVIILMTWLIALGDTTHIVVGSVEILYLVFNGTLHWSDFIWPFALPTLAGNIC 266

Query: 258 GGSFIFALISHAQIRSEGSLPDKKAADPR 286
           GG+FIFAL+SHAQIR++  + +K+ A+ R
Sbjct: 267 GGTFIFALMSHAQIRND--MSNKRKAEAR 293