Pairwise Alignments

Query, 554 a.a., NAD-dependent DNA ligase LigB from Pseudomonas simiae WCS417

Subject, 785 a.a., NAD-dependent DNA ligase LigA from Pseudomonas simiae WCS417

 Score =  128 bits (321), Expect = 9e-34
 Identities = 139/591 (23%), Positives = 249/591 (42%), Gaps = 72/591 (12%)

Query: 26  ARAQVNTLTEQIRLWDDSYHRLNQSPVSDELYDQAHQRLTHWRRCFPE-----SPPKPDN 80
           A  ++  L  ++   +  YH L++  + D  YD+    L       P+     SP +   
Sbjct: 4   AHTRILELRAELDQHNYRYHVLDEPSIPDAEYDRLFHELKALEAEHPDLVTRDSPTQRVG 63

Query: 81  PLASSRGT-LRHPIAHTGLEKLLDEQAV---------GAWLSTRQ--------DVWIQPK 122
             A S  T ++H I    L    DE  +         G  L            +   +PK
Sbjct: 64  SAALSAFTQVKHEIPMLSLGNAFDETTMLEFDRRVTEGLDLPAGDLFGGGAAVEYSCEPK 123

Query: 123 VDGVAVTLVYRQGRLRQVISRGDGLMGHDWSASARRIPGIVQQLPE---PIDLVLQGELY 179
           +DG+AV+L+Y+ G L +  +RGDG  G D S + R +  I  +L     P +L ++GE++
Sbjct: 124 LDGLAVSLLYQDGELVRGATRGDGTTGEDISVNVRTVRNIPLKLHGSGWPANLEVRGEVF 183

Query: 180 -----WHLDDHVQSANGG---LNARSKVAGLMNRLELSDADAAGIGLFVWA-WPEGPGSF 230
                +   +  Q   GG    N R+  AG + +L+     +  +    +    +   + 
Sbjct: 184 MSKAGFERLNASQLEVGGKTFANPRNAAAGSLRQLDSKITASRPLEFCCYGVTTDISDTH 243

Query: 231 TERLAALARWGFTDSR--RYSQPIRDIAEATHWRAYWYN-HPLPFASDGVVLHQAQRPPA 287
              L  L +WG   SR  + ++ I+D  E  ++R      + LP+  DGVV         
Sbjct: 244 IGNLQQLQKWGMPISRELKLAKGIQDCLE--YYRDIGERRNSLPYEIDGVVFKVNSIASQ 301

Query: 288 RR--WKASEPYWAVAWKYPAAKALALVRNVRFKIGRTGRITPMLELEPVQLDDRQISRVS 345
           R   ++A EP WA+A K+PA + L  + +V F++GRTG +TP+  L+PV++    +S  +
Sbjct: 302 RELGFRAREPRWAIAHKFPAMEELTELLDVEFQVGRTGAVTPVARLKPVKVAGVTVSNAT 361

Query: 346 AGSLKRWQTLDIRPGDQVSISLAGQVIPRLDEVILRNAHRADLAAPDPRDFHA----LSC 401
             ++     L +  GD V I  AG VIP++  V+L        A P P+        +  
Sbjct: 362 LHNMDEVARLGVMIGDTVIIRRAGDVIPQVVSVVLERRPENARAVPIPQSCPVCGSHVER 421

Query: 402 WQLDP--------------------GCEEQLLARLTWLSGNQGLALPHIGRETWNVLIQA 441
            QL                       C  QL   +      + + +  +G +T   L+  
Sbjct: 422 TQLVKRSKGKETVSEGAVYRCVGRLACGAQLKQAIIHFVSRRAMDIDGLGDKTIEQLVDE 481

Query: 442 GLIASFLDWLTLDVAELANIEGFGDSSRTRVLESLNSARQRSFAQWLKALGVPPAARNNL 501
            LI S  D   L    + ++EGF D S  +++ ++ +++  + A+++ ALG+P       
Sbjct: 482 KLIGSPADLYKLKYEHIIDLEGFADISSKKLITAIENSKSPTLARFIYALGIPDVGEETA 541

Query: 502 EGDWQTLVARD------TQAWLAIDGIGPGRAAQLSAFFRDPQVQALADTL 546
           +   ++L + +       +    +  +G   A ++ +FF D   Q +   L
Sbjct: 542 KVLARSLASLERVQKALPEVLTYLPDVGLEVAHEIHSFFEDSHNQDVIGAL 592