Pairwise Alignments

Query, 554 a.a., NAD-dependent DNA ligase LigB from Pseudomonas simiae WCS417

Subject, 684 a.a., NAD-dependent DNA ligase LigA from Pectobacterium carotovorum WPP14

 Score =  133 bits (334), Expect = 3e-35
 Identities = 141/574 (24%), Positives = 240/574 (41%), Gaps = 58/574 (10%)

Query: 24  DTARAQVNTLTEQIRLWDDSYHRLNQSPVSDELYDQAHQRLTHWRRCFPE-----SPPKP 78
           + A  +V  L   +R  +  YH  +   + D  YD+  Q L       PE     SP + 
Sbjct: 12  NVAALRVAELRRVLRHHEYKYHVEDAPEIPDVEYDKLMQELKSLEAAHPELVTSDSPTQR 71

Query: 79  DN--PLASSRGTLRHPIAHTGLEKLLDEQA-------VGAWLSTRQDVWI--QPKVDGVA 127
               PLA+    +RH +    L+ + DE++       +G  L    D+    + K+DG+A
Sbjct: 72  VGAAPLAAFE-QVRHEVPMLSLDNVFDEESYLAFSKRIGDRLKNGDDLTFCCELKLDGLA 130

Query: 128 VTLVYRQGRLRQVISRGDGLMGHDWSASARRIPGIVQQLPE---PIDLVLQGELYWH--- 181
           V+L+Y +G L Q  +RGDG  G + +++ R +  I  +L     P  + ++GE++     
Sbjct: 131 VSLLYEEGVLVQAATRGDGTTGENITSNIRTVAAIPLRLEGDNIPRRVEVRGEVFMKHSG 190

Query: 182 ---LDDHVQSANGGL--NARSKVAGLMNRLELSDADAAGIGLFVWAWP--EG---PGSFT 231
              L++  +     +  N R+  AG + +L+        +  F +     EG   P S  
Sbjct: 191 FEKLNEEARRTGSKVFANPRNAAAGSLRQLDPRITATRPLTFFCYGVGLLEGGVLPASHW 250

Query: 232 ERLAALARWGFTDSRRYSQPIRDIAEATHWRAYWYNHP-LPFASDGVVLHQAQRPPARR- 289
           ERL     WG   S R             +R        L F  DGVV+         R 
Sbjct: 251 ERLMQFKAWGLPVSDRIKLCTGPAEVLDFYRQVEQTRSSLGFDIDGVVVKVDSLELQERL 310

Query: 290 -WKASEPYWAVAWKYPAAKALALVRNVRFKIGRTGRITPMLELEPVQLDDRQISRVSAGS 348
            + A  P WAVA+K+PA + L  VR+V F++GRTG ITP+  LEPV +    +S  +  +
Sbjct: 311 GFVARAPRWAVAFKFPAQEQLTWVRDVEFQVGRTGAITPVARLEPVAVAGVIVSNATLHN 370

Query: 349 LKRWQTLDIRPGDQVSISLAGQVIPRLDEVILRNAHRADLAAP------------DPRDF 396
               + L ++ GD+V +  AG VIP++  ++   + R +   P            D    
Sbjct: 371 ADEIERLGLQIGDRVIVRRAGDVIPQIVGIV--ESERPETVRPILFPAACPVCGSDVERV 428

Query: 397 HALSCWQLDPG--CEEQLLARLTWLSGNQGLALPHIGRETWNVLIQAGLIASFLDWLTLD 454
              +  +   G  C  Q    L      + L +  +G +  + L++   + +  D   L 
Sbjct: 429 EGEAVTRCTAGLICGAQRKEALKHFVSRRALDVEGMGDKIIDQLVEKEYVKTPADLFRLS 488

Query: 455 VAELANIEGFGDSSRTRVLESLNSARQRSFAQWLKALGVPPAARNNLE------GDWQTL 508
              +  ++  G  S T ++ +L  A+  + A++L ALG+     +         G  + L
Sbjct: 489 AGIMTGLDRMGPKSATNLVNALEKAKSTTLARFLYALGIRDVGESTAANLAAHFGSLEAL 548

Query: 509 VARDTQAWLAIDGIGPGRAAQLSAFFRDPQVQAL 542
            A D  A L +  +G   AA +  F  +   Q +
Sbjct: 549 FAADEDALLEVPDVGKVVAAHVRHFLEEEHNQTV 582