Pairwise Alignments

Query, 554 a.a., NAD-dependent DNA ligase LigB from Pseudomonas simiae WCS417

Subject, 673 a.a., NAD-dependent DNA ligase LigA from Serratia liquefaciens MT49

 Score =  135 bits (341), Expect = 4e-36
 Identities = 145/552 (26%), Positives = 236/552 (42%), Gaps = 62/552 (11%)

Query: 29  QVNTLTEQIRLWDDSYHRLNQSPVSDELYDQAHQRLTHWRRCFPE-----SPPKPDN--P 81
           Q+N L   +R  +  YH L+   V D  YD+  + L       PE     SP +     P
Sbjct: 7   QINQLRTSLRHHEYQYHVLDAPEVPDAEYDRLMRELRELESAHPELITADSPTQRVGAAP 66

Query: 82  LASSRGTLRHPIAHTGLEKLLDEQAVGAWLSTRQD---------VWIQPKVDGVAVTLVY 132
           LA+    +RH +    L+ + DE++  A+    QD            + K+DG+AV+L+Y
Sbjct: 67  LAAF-DQVRHEVPMLSLDNVFDEESFLAFYKRVQDRLKSSEPLTFCCELKLDGLAVSLLY 125

Query: 133 RQGRLRQVISRGDGLMGHDWSASARRIPGIVQQLPE---PIDLVLQGELYW------HLD 183
             G L +  +RGDG  G + +++ R I  I  +L     P  L ++GE++        ++
Sbjct: 126 EDGELVRAATRGDGTTGENITSNVRTIRAIPLRLTGDNIPRRLEVRGEVFMPQAGFEQMN 185

Query: 184 DHVQSANGGL--NARSKVAGLMNRLELSDADAAGIGLFVWA-----WPEGPGSFTERLAA 236
           +  +  +G +  N R+  AG + +L+        +  F +        E P S  +RL  
Sbjct: 186 EEARRKDGKIFANPRNAAAGSIRQLDPRITAKRPLTFFCYGVGLLEGGELPRSHWQRLMQ 245

Query: 237 LARWGFTDSRRYSQPIRDIAEATHWRAYWYNHP-LPFASDGVV--LHQAQRPPARRWKAS 293
              WG   S R             +R    +   L F  DGVV  +          + A 
Sbjct: 246 FKAWGLPVSDRAKCCTGSDEVLAFYRQVEQDRAQLGFDIDGVVVKIDDIDLQETLGFVAR 305

Query: 294 EPYWAVAWKYPAAKALALVRNVRFKIGRTGRITPMLELEPVQLDDRQISRVSAGSLKRWQ 353
            P WA A+K+PA + + LVR V F++GRTG ITP+  LEPV +    +S  +  +    +
Sbjct: 306 APRWATAFKFPAQEQITLVREVEFQVGRTGAITPVARLEPVLVAGVIVSNATLHNADEIE 365

Query: 354 TLDIRPGDQVSISLAGQVIPRLDEVIL--RNAHRADLAAPDPRDFHALSCWQLDPGCEEQ 411
            L +R GD V +  AG VIP++  V+   R A   ++  P     H   C       E +
Sbjct: 366 RLGLRIGDTVIVRRAGDVIPQVVGVMTDRRPADAREVVFPQ----HCPVCGSDVERVEGE 421

Query: 412 LLARLTW---LSGNQGLALPH-----------IGRETWNVLIQAGLIASFLDWLTLDVAE 457
            +AR T     +  +  AL H           +G +    L++   + +  D   L    
Sbjct: 422 AVARCTGGLICAAQRKEALKHFVSRRALDVDGMGDKIIEQLVEKEYVKNPADLFRLSAGI 481

Query: 458 LANIEGFGDSSRTRVLESLNSARQRSFAQWLKALG---VPPAARNNLE---GDWQTLVAR 511
           L  ++  G  S   ++ +L  ++Q +FA++L ALG   V  A   NL    G  + L A 
Sbjct: 482 LTGLDRMGPKSAQNLVNALEKSKQTTFARFLYALGIREVGEATAANLAAHFGTLEKLFAA 541

Query: 512 DTQAWLAIDGIG 523
           D +A   +  +G
Sbjct: 542 DIEALKEVPDVG 553