Pairwise Alignments

Query, 554 a.a., NAD-dependent DNA ligase LigB from Pseudomonas simiae WCS417

Subject, 683 a.a., NAD-dependent DNA ligase LigA from Dickeya dianthicola 67-19

 Score =  134 bits (338), Expect = 9e-36
 Identities = 132/520 (25%), Positives = 224/520 (43%), Gaps = 56/520 (10%)

Query: 25  TARAQVNTLTEQIRLWDDSYHRLNQSPVSDELYDQAHQRLTHWRRCFPE--SPPKPDNPL 82
           T   Q+  L  Q+R  +  YH  +   + D  YD+    L    +  PE  +   P   +
Sbjct: 14  TVSVQIEALRAQLRYHEYKYHVEDAPEIPDAEYDKLMNALKTLEQAHPELVTSDSPTQRV 73

Query: 83  ASSR----GTLRHPIAHTGLEKLLDEQAVGAWLSTRQD---------VWIQPKVDGVAVT 129
            ++      T+ H +    L+ + DE +  A+     D            + K+DG+AV+
Sbjct: 74  GAAPLDAFDTIAHEVPMLSLDNVFDEPSFLAFSKRINDRLKNDGELTFCCELKLDGLAVS 133

Query: 130 LVYRQGRLRQVISRGDGLMGHDWSASARRIPGIVQQLPE---PIDLVLQGELYWH----- 181
           L+Y  G L +  +RGDG  G + +A+ R +  I  +L     P  L ++GE++       
Sbjct: 134 LLYENGLLVRAATRGDGTTGENITANIRTVGAIPLRLRGDNIPARLEVRGEVFMKHKGFD 193

Query: 182 -LDDHVQSANGGL--NARSKVAGLMNRLELSDADAA-------GIGLFVWAWPEG---PG 228
            L++  + A G +  N R+  AG + +L+              G+GL      EG   P 
Sbjct: 194 ALNEDARRAGGKVFANPRNAAAGSLRQLDPRITATRPLTFLCYGVGLV-----EGGTLPD 248

Query: 229 SFTERLAALARWGFTDSRRYSQPIRDIAEATHWRAYWYNHP-LPFASDGVVLHQAQRPPA 287
           +  +RL     WG   S R        A    +R        L F  DGVV+   +    
Sbjct: 249 THWQRLMQFRDWGLPVSDRIRLCTGSEAVLDFYRQVEQGRETLGFDIDGVVIKVNELTLQ 308

Query: 288 RR--WKASEPYWAVAWKYPAAKALALVRNVRFKIGRTGRITPMLELEPVQLDDRQISRVS 345
            R  + A  P WAVA+K+PA + L  +R+V F++GRTG ITP+  LEPV +    +S  +
Sbjct: 309 ERLGFVARAPRWAVAFKFPAQEQLTWLRDVEFQVGRTGAITPVARLEPVAVAGVVVSNAT 368

Query: 346 AGSLKRWQTLDIRPGDQVSISLAGQVIPRLDEVIL--RNAHRADLAAPDPRDFHALSCWQ 403
             +    + L I+ GD+V++  AG VIP++  V+L  R A    +  P+          +
Sbjct: 369 LHNADEIERLGIQIGDRVAVRRAGDVIPQIVSVVLSERPADARPVVFPEQCPVCGSELER 428

Query: 404 LDPG----------CEEQLLARLTWLSGNQGLALPHIGRETWNVLIQAGLIASFLDWLTL 453
           ++            C  Q    L      + L +  +G +  + L++   + +  D   L
Sbjct: 429 VEGEVVTRCTGGLFCGAQRKEALKHFVSRRALDVEGMGDKVIDQLVEKEYVKTPADLFRL 488

Query: 454 DVAELANIEGFGDSSRTRVLESLNSARQRSFAQWLKALGV 493
               L  ++  G  S   ++ +LN A+  +FA++L ALG+
Sbjct: 489 SAGILTGLDRMGPKSAQNLVNALNKAKSTTFARFLYALGI 528