Pairwise Alignments

Query, 554 a.a., NAD-dependent DNA ligase LigB from Pseudomonas simiae WCS417

Subject, 682 a.a., DNA ligase from Acinetobacter radioresistens SK82

 Score =  115 bits (287), Expect = 7e-30
 Identities = 129/580 (22%), Positives = 243/580 (41%), Gaps = 59/580 (10%)

Query: 29  QVNTLTEQIRLWDDSYHRLNQSPVSDELYDQAHQRLTHWRRCFPESPPKPDNPLASSRG- 87
           Q+  L + I   + +Y+ ++Q  +SD  YD    +L      +P+     D P     G 
Sbjct: 14  QMRQLIQLIAQHNHAYYVMDQPSISDNEYDSLFHQLKALEEQYPDLVQN-DTPTRRVGGQ 72

Query: 88  ------TLRHPIAHTGLEKLLDEQAVGAWLSTRQD--------VWIQPKVDGVAVTLVYR 133
                 ++RH +    L  + +++ + A+    ++          ++ K+DG+A++L Y 
Sbjct: 73  ALSKFMSVRHAVPMLSLGNVFNKEDLFAFARRVEERLPGQQVKYEVELKLDGLAISLWYE 132

Query: 134 QGRLRQVISRGDGLMGHDWSASARRIPGIVQQLPE-----PIDLVLQGE--------LYW 180
            G L + ++RGDG  G D + + + I  + + L       P  L ++GE        L  
Sbjct: 133 NGELVRGVTRGDGETGEDITQNVKTIRNLPKYLYSDQAAIPKLLEVRGEVLIPKTGFLKL 192

Query: 181 HLDDHVQSANGGLNARSKVAGLMNRLELSDADAAGIGLFVWAWPEGP-----GSFTERLA 235
           + ++  +      N R+  AG + +L+   A A  +  + +   +        S TE L 
Sbjct: 193 NAENEAKGEKIFANPRNAAAGSLRQLDPGIAAARPLAFYAYGIAQCEPEHHLNSMTESLH 252

Query: 236 ALARWGFTDSRRY--SQPIRDIAEATHWRAYWYNHPLPFASDGVVLHQAQRPPARR--WK 291
            L   GF  + R      I ++ +  + +       L    DG+V+        ++  + 
Sbjct: 253 WLRDLGFEIAERQFLCDSIEEV-QRRYEKIMEERADLGVEIDGMVVKVDSLKQQKQLGFL 311

Query: 292 ASEPYWAVAWKYPAAKALALVRNVRFKIGRTGRITPMLELEPVQLDDRQISRVSAGSLKR 351
           + EP WA A+K+PA  AL  V N+ +++GRTG +TP+  L PV +    +S V+  ++  
Sbjct: 312 SREPRWATAYKFPAIAALTTVENIDWQVGRTGILTPVARLNPVFVGGVTVSNVTLHNIGE 371

Query: 352 WQTLDIRPGDQVSISLAGQVIPRLDEV----------ILRNAHRADLAAPD--PRDFHAL 399
              LD+R GD VS+   G VIP++++V          ++       + A      +  AL
Sbjct: 372 IHRLDVRIGDTVSVYRTGDVIPKVEKVWPEFRPDTAEVINLPETCPVCASPVVMPEGEAL 431

Query: 400 SCWQLDPGCEEQLLARLTWLSGNQGLALPHIGRETWNVLIQAGLIASFLDWLTLDVAE-- 457
           +    +  C  Q +  +      + + +  +G      L+   L+    D   L      
Sbjct: 432 ARCSGELYCAAQRIESIRHFVSRKAMDIEGLGDRWVESLLHLELLKDVSDIYHLHQHRNT 491

Query: 458 LANIEGFGDSSRTRVLESLNSARQRSFAQWLKALGVPPAARNN---LEGDWQTLVA---R 511
           L  IE  G+ S   ++ ++  +++ + A+++ ALG+          L   +QTL A    
Sbjct: 492 LLGIEKMGEKSVQNLINAIEQSKKTTLARFIYALGIRGVGETTARMLANSFQTLEALQQA 551

Query: 512 DTQAWLAIDGIGPGRAAQLSAFFRDPQVQALADTLRVAGI 551
           D  +   +  +G   A  +  FFR      + D L  AGI
Sbjct: 552 DVDSLKKVPDVGDITAEWIYDFFRAEHNLEVIDRLLAAGI 591