Pairwise Alignments

Query, 245 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 251 a.a., amino acid ABC transporter substrate-binding protein, PAAT family from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  329 bits (843), Expect = 4e-95
 Identities = 162/245 (66%), Positives = 197/245 (80%)

Query: 1   MPRFSRAVALIGVLLLAQPAFAQRLRLVADAWPPFTDATLINGGLATDIVSTALARAGYA 60
           M +  RAV ++  LL+A    A++LRLVAD WPPFTDA L+NGGLATDIV+TAL RAGY 
Sbjct: 1   MSQLLRAVGVLVFLLMAHVNAAEKLRLVADPWPPFTDALLLNGGLATDIVNTALRRAGYT 60

Query: 61  SDFEQVPWARALMGVGDGRYDVLVNAWYDDARTQLGQFSGEYLLNRVRFIKRRDDPIEFQ 120
           + +EQVPWARA++G+  GR+DVL+NAW+ D RT++GQFS +YLLNR+RFIKR++ PI   
Sbjct: 61  TLYEQVPWARAMLGLSQGRHDVLINAWFSDERTKIGQFSAQYLLNRIRFIKRKESPIGTL 120

Query: 121 NLEQLHDYPIAVVRGYAYSAAFDGDAQLQKVPVHNFAMAVRMLAAQRVRLTVEDEYVARY 180
             EQLH Y IAVVRGYAY+ AFD D+QLQKVPV NF+ A+RMLAA+RV LT+EDEYVARY
Sbjct: 121 THEQLHQYVIAVVRGYAYAPAFDSDSQLQKVPVQNFSTAIRMLAAERVDLTLEDEYVARY 180

Query: 181 YLSRESTRVRNTVEFLPKPLSENSLHILVSLKNPEHAQIVASFDREIAKMKADGSYARLM 240
            L+ E   VR+ VEFLP  LSENSLHILVSLKNP H +IVA FDREIA MKADG+Y  L+
Sbjct: 181 NLAMERDEVRDRVEFLPGSLSENSLHILVSLKNPHHDKIVADFDREIAAMKADGTYDELL 240

Query: 241 KQHGM 245
           + HG+
Sbjct: 241 RLHGL 245