Pairwise Alignments

Query, 475 a.a., EmrB/QacA subfamily drug resistance transporter from Pseudomonas simiae WCS417

Subject, 471 a.a., Putative multidrug resistance protein MdtD from Escherichia coli ECRC62

 Score =  394 bits (1013), Expect = e-114
 Identities = 206/452 (45%), Positives = 297/452 (65%), Gaps = 2/452 (0%)

Query: 11  TARWLPWVVAIAFFMQSLDGTILNTALPAMARDLAENPLRMQGVVIAYMLTVALLIPASG 70
           + RW  W+VA  FFMQSLD TI+NTALP+MA+ L E+PL M  V+++Y+LTVA+++PASG
Sbjct: 7   STRWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASG 66

Query: 71  WIADRFGTKKIFFGAIMLFSIGSLLCALSSSLTMLVGARVIQGLGGALMLPVGRLVVLRA 130
           W+AD+ G + IFF AI+LF++GSL CALS +L  L+ AR +QG+GGA+M+PVGRL V++ 
Sbjct: 67  WLADKVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARALQGVGGAMMVPVGRLTVMKI 126

Query: 131 YPRSELVRIMGFITIPGLLGPLLGPTMGGWMVQYLTWHWIFLINLPVGMIGCYAVWKFIP 190
            PR + +  M F+T+PG +GPLLGP +GG +V+Y +WHWIFLIN+PVG+IG  A    +P
Sbjct: 127 VPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMP 186

Query: 191 DLRGTERTRFDGIGFLLFGAAMILITIAMEGLGELHLPHLRVMLLLFGGLACLAAYWLRA 250
           +     R RFD  GFLL    M ++T+A++G     L  L +  L+  G+  L  Y L A
Sbjct: 187 NYTMQTR-RFDLSGFLLLAVGMAVLTLALDGSKGTGLSPLTIDGLVAVGVVALVLYLLHA 245

Query: 251 GHIDNPLFSPVLFKTRTFAVGILGNLFARLGSGALPFLVPLLLQVALGYSPSEAGMSMLP 310
            + +  LFS  LF+TRTF++G+ G+   R+GSG LPF+ P+ LQ+ LG+SP  AG+ M+P
Sbjct: 246 RNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIP 305

Query: 311 LAAAAMFAKSVARPLIEHLGYRIVLTGNTLALGIMLASMGLVTEHTPYPLLLGMLAVLGA 370
           +   +M  K +   ++   GYR VL   TL L ++            Y +L  +L + G 
Sbjct: 306 MVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLSLVTLLFMTTALLGWYYVLPFVLFLQGM 365

Query: 371 INSLQFTAMNTVTLIDLDDAQASSGNSLLSVVAQLSLSLGVACAGALLGGFTAETGNDGV 430
           +NS +F++MNT+TL DL D  ASSGNSLLS++ QLS+S+GV  AG LLG F ++  +   
Sbjct: 366 VNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGSQHVSVDS 425

Query: 431 ESVLGAFQLTFLTVGIMAMLAAAIFLQLSPKD 462
            +    F  T+L++  +  L A IF ++ P D
Sbjct: 426 GTTQTVFMYTWLSMAFIIALPAFIFARV-PND 456