Pairwise Alignments

Query, 281 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 217 a.a., choline ABC transporter permease from Pseudomonas simiae WCS417

 Score = 92.8 bits (229), Expect = 6e-24
 Identities = 54/184 (29%), Positives = 103/184 (55%), Gaps = 5/184 (2%)

Query: 89  QETMETLAQVLFATLVCVVIGVPLGIVAAHKPMFYTMMRPVLDLMQTVPT---FVYLIPT 145
           Q T + +  V  A ++ ++IGVPLGI+    P     ++    ++ TVP+   F  L+P 
Sbjct: 17  QLTGQHITLVGIAVILAILIGVPLGILMTRFPTLAGPLQASATVLLTVPSIALFGLLLPF 76

Query: 146 LTLFG--LGVVPGLISTVVFAIAAPIRLTYLGIRDVPQELMDAGKAFGCSRRQLLSRIEL 203
            + FG  LG +P + +  ++++   +R TYL +  V   + +A +  G +  Q L  +EL
Sbjct: 77  YSKFGQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAARGIGMTFGQRLRMVEL 136

Query: 204 PHAMPSIAAGITQCIMLSLSMVVIAALVGADGLGKPVVNALNTADIALGFEAGLAIVLLA 263
           P A+P I AG+   +++++ ++ IAA +GA GLG  ++ +++ +D+++     + + LLA
Sbjct: 137 PIAVPVILAGVRTAVVMNIGVMTIAATIGAGGLGVLILASISRSDMSMLIVGAVLVSLLA 196

Query: 264 IMLD 267
           I  D
Sbjct: 197 IFAD 200