Pairwise Alignments

Query, 315 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 314 a.a., Carnitine uptake ABC transporter, periplasmic component from Pseudomonas putida KT2440

 Score =  261 bits (667), Expect = 2e-74
 Identities = 140/305 (45%), Positives = 193/305 (63%), Gaps = 7/305 (2%)

Query: 7   LLLAAMLSLPVMAHAAEPAQCQTVNFSDVGWTDITVTTATTSEILKGLGYKPRTTMISVP 66
           L L+++++ P+ A  AEPA C+ V    V WTD+  T+A    +L GLGY+ + T  S  
Sbjct: 12  LALSSIVATPLFA--AEPAACKNVRLGVVNWTDVIATSAMAQVLLDGLGYQTKQTSASQQ 69

Query: 67  VTYKSLADGKNMDVFLGNWMPTMENDIKQYRDAGTVETV-RANLENAKYTLAVPEALYNK 125
           + +  + D K +D+FLG W P M   I  + DA   + + + +LE+A+ TLAVP+ LY+K
Sbjct: 70  IIFAGIRD-KRLDMFLGYWNPIMTQTITPFVDANQFKVLDKPSLEDARATLAVPKYLYDK 128

Query: 126 GLKDFADIAKFKDELGGKIYGIEPGNDGNRTIQTLIDKDAFGLKTAGFKVVESSEAGMLS 185
           GLK FADI KF+ ELGGKIYGIEPG+  N  I+ +I K+ F L    F++VESSEAGML+
Sbjct: 129 GLKTFADIHKFEKELGGKIYGIEPGSGANTQIKAMITKNQFDL--GKFQLVESSEAGMLA 186

Query: 186 QVERATKRDQAIVFLGWEPHPMNTRFKMKYLTGGDDSFGPNYGQATIYTNTRKGYTEECS 245
            V+RA +R +A+VF GW PHPMN    M YL    D+ GP+ G+AT++T T   Y E C 
Sbjct: 187 AVDRAVRRKEAVVFFGWAPHPMNVNIDMAYLGDSQDALGPDEGRATVWTVTAPDYAERCP 246

Query: 246 NVGQLLKNLVFTLNMESTLMGNVLDDKMKPDAAAKAWLKKNPQVLDTWLAGVTTIDGKPG 305
           N  +LL NL F+   ES +M  +LD K   + +A+ WLK +P+    WL GVTT DGKP 
Sbjct: 247 NALRLLANLKFSAEDESRMMQPLLDHKDALE-SARQWLKDHPEDKARWLEGVTTFDGKPA 305

Query: 306 LDAVK 310
            D +K
Sbjct: 306 ADNLK 310