Pairwise Alignments

Query, 367 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 326 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  225 bits (574), Expect = 1e-63
 Identities = 131/312 (41%), Positives = 182/312 (58%), Gaps = 12/312 (3%)

Query: 16  QSIGFLLLDNFTLISLASAVEPLRMANQLSGRELYRWTTLSVDGNQ--VWASDGLQITPD 73
           Q IGFL+  +   ++LA A E L +A ++    +Y    L  +  Q   W   G   T  
Sbjct: 4   QRIGFLIWPSTRPLTLALAEEVLLVAQRVHPDVVYELVFLQAEPAQEGAWRLPGEPWTGR 63

Query: 74  AS-MHKAPAL-DTVIVCGGVGIQRTVTREHVSWLQSQARQSRRLGAVCTGSWALACAGLL 131
               HK   L D      G              L+  AR    +G +  G + LA  GLL
Sbjct: 64  LEGCHKLFLLADEPPAAMGAAFSAA--------LKQLARSGCLIGGLSAGVYPLAMLGLL 115

Query: 132 DGFDCSVHWECLASMQEAFPRVAMSTRLFTLDRNRFTSSGGTAPLDMMLHLISRDHGREL 191
           DG+  +VHW       E FP+V  ++ LF  DR+R T+ GG A  D++L +++RDHG EL
Sbjct: 116 DGYRAAVHWRWQDDFAERFPKVIATSHLFDWDRDRLTACGGMAVTDLLLAVLARDHGAEL 175

Query: 192 SAAISEMFVYERIRNEQDHQRVPLKHMLGTNQPKLQEIVALMEANLEEPIDLDELAVYVA 251
           + A+SE  V ERIR   + QR+PL++ LG++ PKL + V LMEAN+EEP+  DE+A +V 
Sbjct: 176 AGAVSEELVVERIREGGERQRIPLQNRLGSSHPKLTQAVLLMEANIEEPLTTDEIAQHVC 235

Query: 252 VSRRQLERLFQKYLHCSPSRYYLKLRLIRARQLLKQTPMSIIEVASVCGFVSTPHFSKCY 311
           VSRRQLER+F++YL+  PS+YYL+LRL +ARQ+L QT  SII++   CGF S PHFS  Y
Sbjct: 236 VSRRQLERIFKQYLNRVPSQYYLELRLNKARQMLMQTSKSIIQIGLSCGFSSGPHFSSAY 295

Query: 312 REYFGIPPRDER 323
           R +FG  PR++R
Sbjct: 296 RNFFGATPREDR 307