Pairwise Alignments

Query, 367 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 319 a.a., HTH-type transcriptional regulator CdhR from Pseudomonas putida KT2440

 Score =  253 bits (645), Expect = 6e-72
 Identities = 134/313 (42%), Positives = 197/313 (62%), Gaps = 1/313 (0%)

Query: 16  QSIGFLLLDNFTLISLASAVEPLRMANQLSGRELYRWTTLSVDGNQVWASDGLQITPDAS 75
           ++I FLL+  F+ +   SAVEPLR+AN+  G +LYRW  LS+DG  V AS+G+ I  DA+
Sbjct: 7   ETIAFLLVPGFSAMGFISAVEPLRVANRFGG-QLYRWQVLSLDGEAVLASNGMSINADAA 65

Query: 76  MHKAPALDTVIVCGGVGIQRTVTREHVSWLQSQARQSRRLGAVCTGSWALACAGLLDGFD 135
           + +    + ++V  G      V  + +  L+    ++  LG + TG+  LA AGLL+G+ 
Sbjct: 66  LGEGEPANILLVVAGFEPLANVAPKLLHALRRLNHEAVMLGGIDTGAMVLAEAGLLEGYR 125

Query: 136 CSVHWECLASMQEAFPRVAMSTRLFTLDRNRFTSSGGTAPLDMMLHLISRDHGRELSAAI 195
            ++HWE L + +E +P +  +  LF +DR+R T +GGTA +D+MLHLI++ HG EL+  +
Sbjct: 126 ATLHWEALEAFKERYPGLQATQELFEIDRSRITCAGGTASIDLMLHLIAQSHGSELAVKV 185

Query: 196 SEMFVYERIRNEQDHQRVPLKHMLGTNQPKLQEIVALMEANLEEPIDLDELAVYVAVSRR 255
           SE FV  RIR  QDHQR+ +    G +  KL   +  ME ++E P+   ELA  + V+RR
Sbjct: 186 SEQFVLGRIRQRQDHQRMQIGARYGISNKKLVHAIGEMEKHIEPPLSTLELAAAIKVTRR 245

Query: 256 QLERLFQKYLHCSPSRYYLKLRLIRARQLLKQTPMSIIEVASVCGFVSTPHFSKCYREYF 315
           QLERLF+ +L  +PS +YL LRL +ARQLL QT MS+ EV+  CGF    +F++ Y+  F
Sbjct: 246 QLERLFRMHLDATPSGFYLGLRLDKARQLLAQTDMSVTEVSLACGFELPSYFTRRYKLRF 305

Query: 316 GIPPRDERVGSNT 328
           G  PR+ER  S T
Sbjct: 306 GRCPREERRPSGT 318