Pairwise Alignments

Query, 314 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 308 a.a., ABC transporter, substrate binding protein (glycine betaine) from Agrobacterium fabrum C58

 Score =  194 bits (493), Expect = 2e-54
 Identities = 112/303 (36%), Positives = 169/303 (55%), Gaps = 7/303 (2%)

Query: 12  LSASAIL---STNVLAADAASCQNVRMGVVNWTDVIATSAMTQVLLDGLGYKTKQTSASQ 68
           +SA+A++    +   AADA +C+ VRM    W D+  T+ +   LL  L Y+ +      
Sbjct: 4   VSAAALVLAGESPAFAADADACKMVRMAEPGWNDLAFTTGIAMTLLKSLHYQPQSQLLGI 63

Query: 69  QIIFAGIRDQRLDLFLGYWNPLMTQTITPFVDAKQVKVLDKPSLEDARATLAVPTYLADK 128
            +I+  ++ + LD+F+GYW+P M     P+ +   V+ + + +L  A+ T AVPTY+ + 
Sbjct: 64  DVIYTSLKSKDLDVFMGYWDPAMVNYYKPYKEDGSVEKV-RTNLVGAKYTFAVPTYVWEA 122

Query: 129 GLKTFADIAKFEKELGGKIYGIEPGSGANTQIKAMIAKNQFGLGKFQLVESSEAGMLAAV 188
           G+K F+D+ KF  +   K+YGIEPGS  N  +   +     GL  +++VESSE GML+ V
Sbjct: 123 GVKDFSDLQKFADKFDRKLYGIEPGS--NQLMLDAVKDPALGLKDWEVVESSEQGMLSQV 180

Query: 189 DRAVRRKEAVVFFGWAPHPMNVNVAMTYLTGSDDALGPNEGMATVWSVTAPNYAEQCPNV 248
            R  R K  +VF GWAPHPMN    + YLTG D   GP+ G ATV +     Y ++CPNV
Sbjct: 181 ARFNRNKTFIVFQGWAPHPMNAKFDIKYLTGGDKFYGPDFGAATVDTQVRRGYLQECPNV 240

Query: 249 HKLLTNLTFTAADESRMMQPLLDHKDAIE-SAKQWLKDHPQDQARWLEGVTTFDGKPAAA 307
            KLL NL F    E++ M  +++   + E +A Q +K  P     WL+ V   DG+   A
Sbjct: 241 AKLLQNLEFDVEFENKGMDLIMNGGLSPEDAAAQAIKAEPHRLETWLKDVFALDGQNGLA 300

Query: 308 NLK 310
            +K
Sbjct: 301 TVK 303