Pairwise Alignments

Query, 314 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 328 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  137 bits (346), Expect = 3e-37
 Identities = 87/292 (29%), Positives = 148/292 (50%), Gaps = 4/292 (1%)

Query: 22  LEPLRVANRFRGELYRWHVLS-ADGGAVL-ASNGMSVNADAALEPLKKGATLLVVAGFE- 78
           ++   +ANRF     ++ +L+ A+G AV+  S G+ V AD  LE L +   LL+V G   
Sbjct: 27  MDAFAIANRFLPAARQYRLLTLAEGQAVVRGSCGLKVVADRRLEDLPEAVDLLLVPGGPG 86

Query: 79  PLQFATPALEHWLRRLDHEGVTLGAIDTGACVLAEAGLLDGHRLTLHWEAIDAFKEAYPQ 138
               A P +E WL +   +    GAI TG  +L  AGLL+G+R T HW  ++   +A+P+
Sbjct: 87  AYDIALPGIERWLPKAVRQAKRFGAICTGVFLLGRAGLLNGYRCTTHWNYVERLAQAFPE 146

Query: 139 LTV-TQELFEIDRRRITCAGGTASIDLMLDLIAQAHGPELAIQVSEQFVLGRIRPRKDHQ 197
             V T++++ +DR  IT  G TA IDL L ++A+ HG  LA++V++  ++ R R      
Sbjct: 147 AKVETEQIYVMDRCLITSGGITAGIDLALAVVAEDHGKALALEVAKVLLVARHRQGGQTP 206

Query: 198 RMQIATRYGINNKKLVQVIGEMEQHTEPPLSTLALAEAIKVTRRQLERLFRLHLNDTPSN 257
              +      ++  + +V   +  H E   +   +AE + ++ R   R F   +  TP  
Sbjct: 207 YGPLLAAVPRDDSPIARVQAYIVDHIEQAFTVQKMAELVAMSGRNFARTFLREVGITPLQ 266

Query: 258 FYLGLRLEKARQLLRQSDMSVLEVSIACGFESPSYFTRSYRARFAKCPREDR 309
           +    R+++ R+LL   D+ +  V+  CGF S  +  + +  R    P + R
Sbjct: 267 YLQNARIDRTRKLLECGDLPMKVVAAQCGFGSDRHMRKVFFERIGMTPAQYR 318