Pairwise Alignments

Query, 314 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 325 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  119 bits (297), Expect = 1e-31
 Identities = 94/313 (30%), Positives = 155/313 (49%), Gaps = 15/313 (4%)

Query: 1   MSQDFYFLLMP--GFSAIGFISALEPLRVA---NRFRGELY-RWHVLSADGGAVLASNGM 54
           M  D   L+MP   F+ + F + L+ LR +     +  + Y  W V       V +S+G 
Sbjct: 1   MPLDIRLLIMPLPDFALLPFGAFLDKLRFSADDEDYSQQRYCSWMVAGLSLEPVPSSSGA 60

Query: 55  SVNADAALEPLKKGAT--LLVVAGFEPLQFAT--PALEHWLRRLDHEGVTLGAIDTGACV 110
            +  +A  + L       L+V  G   +  A   P  +  LR+    GV L  +D GA +
Sbjct: 61  VLQVEAIADQLDLDLFDYLVVFGGRSAMATAALAPRYQALLRQAAKAGVKLVGVDNGAFL 120

Query: 111 LAEAGLLDGHRLTLHWEAIDAFKEAYPQLTVTQE-LFEIDRRRITCAGGTASIDLMLDLI 169
           LA  GLL GH++ +HW     F+ A+PQL + +E L+ ID  RITCAGGTA+IDL + L+
Sbjct: 121 LAACGLLQGHKVVVHWRHEAEFRAAFPQLQLLREQLYCIDGNRITCAGGTAAIDLAVALL 180

Query: 170 AQAHGPELAIQVSEQFVLGRIRPRKDHQR-MQIATRYGINNKKLVQVIGEMEQHTEPPLS 228
           ++A G   A++     ++   R  +   R +++    G   +++ +    M  H   PL+
Sbjct: 181 SRACGRTRALKGLADMLVDETRDSRHALRSLELGACQG---RQVQRAQALMRHHLGTPLA 237

Query: 229 TLALAEAIKVTRRQLERLFRLHLNDTPSNFYLGLRLEKARQLLRQSDMSVLEVSIACGFE 288
              LA  + ++RRQL+R F+     +   ++L +RL++AR  L  S  S+ +++   G  
Sbjct: 238 VEQLAAELGISRRQLDRQFQASHGMSTKAWWLEMRLQQARWRLLNSSHSLAQIADEVGLG 297

Query: 289 SPSYFTRSYRARF 301
             SY  +  R RF
Sbjct: 298 DASYLGKCVRRRF 310