Pairwise Alignments

Query, 314 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 335 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  152 bits (385), Expect = 8e-42
 Identities = 103/309 (33%), Positives = 156/309 (50%), Gaps = 15/309 (4%)

Query: 7   FLLMPGFSAIGFISALEPLRVANRFRGELYRWHVLSADGGAVLASNGMSVNADAALEPLK 66
           F+L+  FS   F  A++ L  AN  R + +++  LS DG  VL+  G+ + A        
Sbjct: 34  FILLEHFSMASFTVAMDVLVTANLLRADSFQFTPLSLDGDRVLSDLGLELVATELSAAAL 93

Query: 67  KGATLLVVAGFEPLQFATPALEHWLRRLDHEGVTLGAIDTGACVLAEAGLLDGHRLTLHW 126
           K   LLVV G        P L+  L      G+ LG +  GA  L  AG+LD +  ++H 
Sbjct: 94  KELDLLVVCGGLRTPLKYPELDRLLNDCAAHGMALGGLWNGAWFLGRAGVLDDYGCSIHP 153

Query: 127 EAIDAFKEAYPQLTVTQELFEIDRRRITCAGGTASIDLMLDLIAQAHGPELAIQVSEQFV 186
           E   +  E  PQ  +T   F +DR R++ A    +++LML L+ + +G  LA  V E   
Sbjct: 154 EQRASLSERSPQTRITPASFTLDRDRLSAASPNGAMELMLGLVRRLYGDGLAEGVEEILS 213

Query: 187 LGRIRPRKDHQRMQIATRYGINNKK-----LVQVIGEMEQHTEPPLSTLALAEAIKVTRR 241
               R R          + G   KK     L  ++  ME + E  LS   LA     +RR
Sbjct: 214 FSGARYR----------QVGPGAKKSMSLHLRTIVELMENNLEETLSLDQLAAYSGRSRR 263

Query: 242 QLERLFRLHLNDTPSNFYLGLRLEKARQLLRQSDMSVLEVSIACGFESPSYFTRSYRARF 301
           Q++RLF+  L  +P  +Y+ LR+ K+R+LL+ SD+SV+EV++ACGF S S+F++ Y A F
Sbjct: 264 QIDRLFQAQLGTSPRRYYMELRITKSRRLLQYSDLSVMEVAVACGFVSVSHFSKCYAAYF 323

Query: 302 AKCPREDRR 310
              P  ++R
Sbjct: 324 GYPPSREQR 332