Pairwise Alignments

Query, 314 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 319 a.a., HTH-type transcriptional regulator CdhR from Pseudomonas putida KT2440

 Score =  460 bits (1183), Expect = e-134
 Identities = 234/310 (75%), Positives = 260/310 (83%)

Query: 1   MSQDFYFLLMPGFSAIGFISALEPLRVANRFRGELYRWHVLSADGGAVLASNGMSVNADA 60
           M +   FLL+PGFSA+GFISA+EPLRVANRF G+LYRW VLS DG AVLASNGMS+NADA
Sbjct: 5   MMETIAFLLVPGFSAMGFISAVEPLRVANRFGGQLYRWQVLSLDGEAVLASNGMSINADA 64

Query: 61  ALEPLKKGATLLVVAGFEPLQFATPALEHWLRRLDHEGVTLGAIDTGACVLAEAGLLDGH 120
           AL   +    LLVVAGFEPL    P L H LRRL+HE V LG IDTGA VLAEAGLL+G+
Sbjct: 65  ALGEGEPANILLVVAGFEPLANVAPKLLHALRRLNHEAVMLGGIDTGAMVLAEAGLLEGY 124

Query: 121 RLTLHWEAIDAFKEAYPQLTVTQELFEIDRRRITCAGGTASIDLMLDLIAQAHGPELAIQ 180
           R TLHWEA++AFKE YP L  TQELFEIDR RITCAGGTASIDLML LIAQ+HG ELA++
Sbjct: 125 RATLHWEALEAFKERYPGLQATQELFEIDRSRITCAGGTASIDLMLHLIAQSHGSELAVK 184

Query: 181 VSEQFVLGRIRPRKDHQRMQIATRYGINNKKLVQVIGEMEQHTEPPLSTLALAEAIKVTR 240
           VSEQFVLGRIR R+DHQRMQI  RYGI+NKKLV  IGEME+H EPPLSTL LA AIKVTR
Sbjct: 185 VSEQFVLGRIRQRQDHQRMQIGARYGISNKKLVHAIGEMEKHIEPPLSTLELAAAIKVTR 244

Query: 241 RQLERLFRLHLNDTPSNFYLGLRLEKARQLLRQSDMSVLEVSIACGFESPSYFTRSYRAR 300
           RQLERLFR+HL+ TPS FYLGLRL+KARQLL Q+DMSV EVS+ACGFE PSYFTR Y+ R
Sbjct: 245 RQLERLFRMHLDATPSGFYLGLRLDKARQLLAQTDMSVTEVSLACGFELPSYFTRRYKLR 304

Query: 301 FAKCPREDRR 310
           F +CPRE+RR
Sbjct: 305 FGRCPREERR 314