Pairwise Alignments

Query, 222 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 239 a.a., Transcriptional regulatory protein OmpR from Xanthobacter sp. DMC5

 Score =  142 bits (357), Expect = 7e-39
 Identities = 87/228 (38%), Positives = 129/228 (56%), Gaps = 11/228 (4%)

Query: 2   PHILIVEDEAAIADTLIFALQGEGFTTTWLTLGQAALEHQRQTPADLIILDIGLPDITGF 61
           PHIL+V+D   I + L   L   GF  +  + G    +  R    DL++LDI +P   G 
Sbjct: 5   PHILVVDDHREIRELLAKYLTRNGFRVSVASGGVDMRQQMRTGTFDLVVLDIMMPGEDGL 64

Query: 62  ETCKQLRRFSEVPVMFLSARDGEIDRVVGLEIGADDYVVKPFSPREVTARVRAILKRI-G 120
             C+QLR+ S++PV+ L+A   E DR+VGLE+GADDYV KPF+PRE+ AR+RAIL+R  G
Sbjct: 65  TLCRQLRQASDIPVVLLTAVAEETDRIVGLELGADDYVTKPFNPRELLARIRAILRRAQG 124

Query: 121 PGAA----PAVFQVDL------ERMQIAYRGQPLSLTRHEFRLLQSLLEQPERVFSREQL 170
           P  A    PA+++ D        R+ +   G  + L   EFRLL + + +P  V SR+QL
Sbjct: 125 PTRAQQGDPALYRFDRWQLDPGRRVLLDETGSEVRLGSAEFRLLLAFVTRPSVVLSRDQL 184

Query: 171 LDAVGVAADAGYERNIDSHIKSLRSKLRSVAADAEPIQTHRGLGYSYS 218
           LD         ++R+ID+ +  LR ++     +   I+T  G GY ++
Sbjct: 185 LDITAGRPAQVFDRSIDNLVSRLRRRIERDPQNPTLIKTVWGDGYVFA 232