Pairwise Alignments

Query, 222 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 249 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

 Score =  152 bits (384), Expect = 5e-42
 Identities = 91/229 (39%), Positives = 132/229 (57%), Gaps = 14/229 (6%)

Query: 4   ILIVEDEAAIADTLIFALQGEGFTTTWLTLGQAALEHQRQTPADLIILDIGLPDITGFET 63
           +LI EDE  IAD LI  L+  GF T     G+ ALE       DL++LD+ +P + G++ 
Sbjct: 22  VLIAEDEPEIADILIAYLKRSGFRTAHALDGRRALELHLSLKPDLMLLDVLMPHVDGWQV 81

Query: 64  CKQLRRFSEVPVMFLSARDGEIDRVVGLEIGADDYVVKPFSPREVTARVRAILKR---IG 120
             ++R     PV+ L+A+D ++D+++GL IGADDY+VKPF+P EV AR +A+L+R     
Sbjct: 82  LAEVRHRGNTPVIMLTAQDQDMDKLMGLRIGADDYIVKPFNPAEVVARTQAVLRRSVNYT 141

Query: 121 PGAAPAV-----FQVDLERMQ----IAYRGQPLSLTRHEFRLLQSLLEQPERVFSREQLL 171
            G + +V     F++D+E  Q    I+    PL LT  EF+LL  L   P+RVFSR +LL
Sbjct: 142 SGVSASVLRVDGFEIDIESHQVTVNISGNALPLLLTVTEFKLLAQLARAPKRVFSRAELL 201

Query: 172 DAVGVAADAGYERNIDSHIKSLRSKLRSVAADAEPIQTHRGLGYSYSPG 220
                 +D+  ER +DSHI  LR K+  +     P    RG+GY +  G
Sbjct: 202 ALCSPESDS-LERTVDSHISKLRRKIEDLGLQGVPASI-RGVGYRFGSG 248