Pairwise Alignments

Query, 236 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 236 a.a., L-lysine and D-lysine ABC transporter, permease component 2 (from data) from Pseudomonas putida KT2440

 Score =  354 bits (909), Expect = e-103
 Identities = 180/235 (76%), Positives = 201/235 (85%)

Query: 1   MNIESLLSALLNLELFERYAPRFIDGLLVTAKLVAISFSLGALLGLLLALGRLSSNRWLR 60
           M+ + LL+ +L+ +L ERY PRFIDGLLVTAKLVAISFSLGA+LGLLLAL RLS +  L+
Sbjct: 1   MSFDQLLAMVLDPDLLERYGPRFIDGLLVTAKLVAISFSLGAVLGLLLALARLSRSLVLQ 60

Query: 61  GITGTYMYFFRGSPLLAQLFMLYYGLGSFKSFWQDVGLWWFFRDAWLCTLLAFTLNTAAY 120
            +   Y+YFFRGSPLLAQLF+LYYGLGS K FWQDVGLWWFFRDAW CTLLAFTLNTAAY
Sbjct: 61  RMAAGYVYFFRGSPLLAQLFLLYYGLGSLKGFWQDVGLWWFFRDAWFCTLLAFTLNTAAY 120

Query: 121 QAEIMRGALTAVAPGQREAAQMLGLSRWATLQKVILPQSLLVAVGPLGNELILMIKASSI 180
           QAEI RG+L AVAPGQ EAA+ L L R  T  KVILPQSLLVA+GPLGNELILMIKAS+I
Sbjct: 121 QAEIFRGSLMAVAPGQHEAARALNLKRSTTFFKVILPQSLLVAIGPLGNELILMIKASAI 180

Query: 181 ASLVTLYDLMGVAKLAFSRSFDFQIYLWAAVLYLAIVEVVRRTLRRLERSLSKHI 235
           ASLVT+YDLMGV KLAFSRSFDFQIYLWAAVLYL IVE+VRR L+ LE  L +H+
Sbjct: 181 ASLVTIYDLMGVTKLAFSRSFDFQIYLWAAVLYLVIVELVRRLLKHLEARLGRHL 235