Pairwise Alignments

Query, 239 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 239 a.a., L-lysine and D-lysine ABC transporter, permease component 1 (from data) from Pseudomonas putida KT2440

 Score =  366 bits (939), Expect = e-106
 Identities = 188/238 (78%), Positives = 211/238 (88%)

Query: 1   MLEQLSLLSFANGGWGSALLAGALVTITLALACIPLGLPLGLLVALAARSKRRWLRTGAT 60
           ML+QLSLLSFA+GGWG ALLAGALVT++LALAC+P+GLPLGL+VALAARS++R  R  AT
Sbjct: 1   MLDQLSLLSFASGGWGQALLAGALVTVSLALACLPIGLPLGLVVALAARSRKRLPRAWAT 60

Query: 61  VFSTVFRGLPELLTLLIIYYGCQIAAQRMLAAMGYQGEVTINTFVAAMIAFSLVFAAFSS 120
            FSTVFRGLPELLTLLIIYYGCQIAAQ++LAAMGYQGE  INTF+AAMIAFSLVFAAFSS
Sbjct: 61  TFSTVFRGLPELLTLLIIYYGCQIAAQKILAAMGYQGEFLINTFLAAMIAFSLVFAAFSS 120

Query: 121 EVWLSAFKSLSKGQFEAATMLGLPKGTTLRKVVLPQLTRIALPGLSNNWLSLLKDTSLVS 180
           E+WL+AFK+L KGQ EA + LGL K T   KV+LPQLTRIALPGLSNNWLSLLKDTSLVS
Sbjct: 121 EIWLAAFKTLPKGQLEACSALGLSKRTGFFKVLLPQLTRIALPGLSNNWLSLLKDTSLVS 180

Query: 181 TISLVDLMRQTSLAVSVTKEPMLFYAVACFGYLFFSALSGRVFNFLERYFSRHQLSAK 238
           TISLVDLMRQT+LAVSVTKEPM FY VAC GYL F+ALSGRVF ++ER  +RH   A+
Sbjct: 181 TISLVDLMRQTNLAVSVTKEPMFFYGVACLGYLLFAALSGRVFAYIERRSNRHLQGAR 238