Pairwise Alignments

Query, 253 a.a., amino acid ABC transporter from Pseudomonas simiae WCS417

Subject, 258 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  180 bits (456), Expect = 3e-50
 Identities = 103/255 (40%), Positives = 142/255 (55%), Gaps = 4/255 (1%)

Query: 3   KLTSTITTATLWLLCTVAGAAHAETLRIASEGAYPPFNYVDSNNRLHGFDIDIANALCER 62
           K  S IT   L LL +    A  +TLRI  E AYPPF       ++ GFD DI NALC +
Sbjct: 2   KKRSLITVLALGLLASSHAMAAEKTLRIGIEAAYPPFASKTEEGKIVGFDYDIGNALCAQ 61

Query: 63  MKVNCTFVTQDWEGMIPALLAKKYDAIVASMNVTEERKKKIAFTNRYYRTPLSVAVAHDS 122
           MKV C +V  +++G+IP+L  KK D  ++SM + E+RKK + FT++YY T   + +   +
Sbjct: 62  MKVKCVWVEGEFDGLIPSLKVKKIDMALSSMTINEDRKKSVDFTHKYYFTSSRLVMKEGA 121

Query: 123 GISDAQTNFKGLTVGAQSYSTQAIYAEEHYAEAGATVKLYPSQDEAASDLAAGRLDGVIA 182
            + D   + KG T+G Q  +T   YA E +   G  VK Y + +E   DLAAGRLD + A
Sbjct: 122 VVDDQYASLKGKTIGVQRATTTDRYATEVFEPKGINVKRYSNNEEIYMDLAAGRLDAIFA 181

Query: 183 DKYPLLAWVAGAGKDCCTFLG----DIDGTNTDAAIAVRQGDVELRERLNKALDEIVADG 238
           D  PL  ++         F+G    D       A IAVR+G+ EL  +LN A+D I A G
Sbjct: 182 DTIPLNDFLQMPRGKGYAFVGPELKDPKYVGEGAGIAVRKGNTELVGQLNAAIDGIRASG 241

Query: 239 TYKNISRRYFAFDIY 253
            Y+ IS++YF  DIY
Sbjct: 242 EYQKISQQYFKSDIY 256