Pairwise Alignments

Query, 253 a.a., amino acid ABC transporter from Pseudomonas simiae WCS417

Subject, 259 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  146 bits (369), Expect = 4e-40
 Identities = 85/252 (33%), Positives = 136/252 (53%), Gaps = 6/252 (2%)

Query: 1   MKKLTSTITTATLWLLCTVAGAAHAETLRIASEGAYPPFNYVDSNNRLHGFDIDIANALC 60
           MKK   T++   L +      A   + LR   + +Y PF    ++  L GFDID+ NA+C
Sbjct: 1   MKKALLTLSALALCMAAGSTLAKEYKELRFGVDPSYAPFESKAADGSLVGFDIDLGNAIC 60

Query: 61  ERMKVNCTFVTQDWEGMIPALLAKKYDAIVASMNVTEERKKKIAFTNRYYRTPLSVAVAH 120
             +KV C +V  D++GMIP L A K+D +++SM VT  R+K I F++  +  P S+    
Sbjct: 61  AELKVKCKWVESDFDGMIPGLKANKFDGVISSMTVTPVREKAIDFSSELFSGPTSLVFKK 120

Query: 121 DSGISDAQTNFKGLTVGAQSYSTQAIYAEEHYAEAGATVKLYPSQDEAASDLAAGRLDGV 180
            +G S  + + KG +VG +  + Q  YA+    +AG T K Y +QD+  +DL +GRLD  
Sbjct: 121 GAGYSTPE-SLKGKSVGYEQGTIQEAYAKAVLDKAGVTTKAYANQDQVYADLTSGRLDAS 179

Query: 181 IAD----KYPLLAWVAGAGKDCCTFLGDIDGTNTDAAIAVRQGDVELRERLNKALDEIVA 236
           + D    +   L   AGAG +    + D     +  AI +++G+ EL+  L+K +  +  
Sbjct: 180 VQDMLQAELGFLKSPAGAGYEVSAAIDD-PLLPSKTAIGIKKGNTELKTLLDKGIKALHD 238

Query: 237 DGTYKNISRRYF 248
           DGTY  I +++F
Sbjct: 239 DGTYATIQKKHF 250