Pairwise Alignments

Query, 253 a.a., amino acid ABC transporter from Pseudomonas simiae WCS417

Subject, 260 a.a., lysine-arginine-ornithine-binding periplasmic protein from Enterobacter asburiae PDN3

 Score =  168 bits (425), Expect = 1e-46
 Identities = 94/258 (36%), Positives = 142/258 (55%), Gaps = 5/258 (1%)

Query: 1   MKKLTSTITTATLWLLCTVAGAAHAETLRIASEGAYPPFNYVDSNNRLHGFDIDIANALC 60
           MKKL  +++    +   T A AA  + +RI ++  Y PF   +S   L GFDID+AN LC
Sbjct: 1   MKKLVLSLSLVLAFSSATAAFAAIPQKIRIGTDPTYAPFESKNSKGELVGFDIDLANELC 60

Query: 61  ERMKVNCTFVTQDWEGMIPALLAKKYDAIVASMNVTEERKKKIAFTNRYYRTPLSVAVAH 120
           +R+K  CT+V    + +IP+L AKK D I++S+++TE+R+++IAFT++ Y     + VA 
Sbjct: 61  KRIKAQCTYVENPLDALIPSLKAKKIDVIMSSLSITEKRQQEIAFTDKLYAADSRLVVAK 120

Query: 121 DSGISDAQTNFKGLTVGAQSYSTQAIYAEEHYAEAGATVKLYPSQDEAASDLAAGRLDGV 180
            S I     + KG  VG    +TQ  Y  EH+A  G  +  Y  Q+   +DL AGR+D  
Sbjct: 121 ASDIQPTLESLKGKRVGVLQGTTQETYGNEHWAPKGIEIVSYQGQENIYADLTAGRIDAA 180

Query: 181 IADKYPLLAWV--AGAGKDC---CTFLGDIDGTNTDAAIAVRQGDVELRERLNKALDEIV 235
             D+            GKD       + D+        + +R+ D ELRE LNKA  E+ 
Sbjct: 181 FQDEVAASEGFLKTPVGKDYKFGGPSIKDVKLFGVGTGMGLRKEDNELREALNKAFAEMR 240

Query: 236 ADGTYKNISRRYFAFDIY 253
           ADGTY  ++++YF F++Y
Sbjct: 241 ADGTYDKLAKKYFDFNVY 258