Pairwise Alignments

Query, 331 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 326 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  107 bits (268), Expect = 3e-28
 Identities = 87/309 (28%), Positives = 150/309 (48%), Gaps = 23/309 (7%)

Query: 8   PVSARVLDAAIAWQLSLDSGDGSAIEREEFDKWLASDEEHARAWRQLGMLDQRFSVASGP 67
           P++     AA+ W   ++   G A E   F +WL +D  H  A+ Q  +L Q+   ++ P
Sbjct: 6   PITEAQFQAALQWFNRINEQPGQA-EGAAFKRWLLADPAHRAAYDQAQVLWQK---SAAP 61

Query: 68  ARAALLQSREGIRQRVRKLG-----------SGLASVALVIGLALFAGERYVPIHYWLAD 116
           A     + ++ +++ +  +            +GLA  A ++ LA+     + P  YWL D
Sbjct: 62  AARLADEEQDALQRYLDAMARPPARGGWRRVAGLALAACLV-LAVGVAGGWHP-GYWLQD 119

Query: 117 QR---TATGEQRTLKLSDGTLINLNTHSAIDVRFDEKRRLVVLQEGEILVETGHNDERPF 173
            +   ++TG+ R + L+D + + L+  SAI V F +  R V L  G    E  H  E PF
Sbjct: 120 LQADYSSTGQIRQVILADQSQVTLDAGSAIAVDFAQGERRVRLLHGAAFFEVTHTGE-PF 178

Query: 174 YVQTRDGSLRALGTRFIVKREDDATRLSVLQSAVAAQPEALHQEQVFKEGQQVLMRSDGL 233
            V+   G +R LGT+F V+ + +  +++V    V   P      +     QQ+  R+  +
Sbjct: 179 LVEAAGGEVRVLGTQFEVREQGEGAQVTVRSGRVGVSPAQGTVARELTANQQLTYRAGRV 238

Query: 234 GPLLAVTPATD-AWTRGMLVVDNARLGEVVEELSRYRTG-YLGVDKNVADLRITGSFPLH 291
           G  LAV      AW +G L      L +V+++L RY  G  L +D ++   +++GSFP+ 
Sbjct: 239 GDTLAVDSDNRLAWRQGWLNYYQVPLAQVIDDLGRYYPGRILLLDGDLGQRKVSGSFPVA 298

Query: 292 DTTLALNAL 300
           +  LAL++L
Sbjct: 299 EPLLALDSL 307