Pairwise Alignments

Query, 331 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 314 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  160 bits (405), Expect = 4e-44
 Identities = 105/313 (33%), Positives = 157/313 (50%), Gaps = 9/313 (2%)

Query: 8   PVSARVLDAAIAWQLSLDSGDGSAIEREEFDKWLASDEEHARAWRQLGMLDQRFSVASGP 67
           P +   L AA  W   LDSGD S  + +   +W AS   H  AW++  +L  RF+   G 
Sbjct: 6   PETREALRAAARWLALLDSGDASESDLQRLAQWRASSHLHEDAWQKASLLRARFAGLPGA 65

Query: 68  ARAALLQSREGIRQRVRKLGSGLASVALVIGLALFAGERYVPIHYWLADQRTATGEQRTL 127
              A L   +  R+ + K   G+ ++  V  L      R +P+  W AD RTA GE+R  
Sbjct: 66  LAMAALDRPDAGRRALLKQALGVTALLPVAWLV----SRELPLDAWTADMRTAVGERRQA 121

Query: 128 KLSDGTLINLNTHSAIDVRFDEKRRLVVLQEGEILVETGHNDERPFYVQTRDGSLRALGT 187
            LSDGTL+ LNT SA+D+     R  V L  GE+ V    N      +Q   G +     
Sbjct: 122 LLSDGTLLQLNTDSAVDIELGAGR--VALLRGEVAVSVPAN--LSLTLQVPYGRVVLSEG 177

Query: 188 RFIVKREDDATRLSVLQSAVAAQPEALHQEQVFKEGQQVLMRSDGLGPLLAVTPATDAWT 247
              ++  D+A R+S ++ AV+ QP       + ++GQQ  +++ G+GP+ A       W 
Sbjct: 178 EACLRLLDEACRVSAIKGAVSLQP-LRGPAVMLQDGQQASLQAAGVGPVKAFDAWQLGWR 236

Query: 248 RGMLVVDNARLGEVVEELSRYRTGYLGVDKNVADLRITGSFPLHDTTLALNALLPTLPVH 307
            G L +D+  LGE++ EL RYR G L     +  LR+TG+F L DT   L  L  +LP+ 
Sbjct: 237 EGALRLDDRPLGELLHELRRYRPGVLRWAPELERLRVTGTFRLDDTDRVLALLAASLPLQ 296

Query: 308 IEQHTPWWVTVKA 320
           ++  T +WV++ A
Sbjct: 297 VQTRTRYWVSLTA 309