Pairwise Alignments

Query, 331 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 335 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  106 bits (264), Expect = 9e-28
 Identities = 85/308 (27%), Positives = 142/308 (46%), Gaps = 18/308 (5%)

Query: 13  VLDAAIAWQLSLDSGDGSAIEREEFDKWLASDEEHARAWRQLGMLDQRFSVASGPARAAL 72
           + DAA  W + L + D +  ERE F  WLA+D  HA  ++ +  + Q   +   P  A +
Sbjct: 14  ITDAAAHWCMRLHAEDCTQAEREAFADWLAADPRHAEEYQAMLEIWQTADLL--PRSATV 71

Query: 73  LQ----SREGIRQRV-RKLGSGLASVALVIGLALFAG--ERYVPIHYWLADQRTATGEQ- 124
           +     +R   R R  R L S  A    V+ LA + G  + ++P HY    Q    G++ 
Sbjct: 72  IDFNPPARHAARPRNWRPLASAAAIALAVLPLAGWMGWEQGWLPNHY----QHFEAGDRM 127

Query: 125 RTLKLSDGTLINLNTHSAIDVRFDEKRRLVVLQEGEILVETGHNDERPFYVQTRDGSLRA 184
           +T++LSDG+ + LN H+ +     + +R V L+ GE   +  H+   PF V+   G  R 
Sbjct: 128 QTVELSDGSTVQLNLHTELTFLNYKDQRQVTLKRGEAFFKVRHDSSHPFIVRAGSGQTRV 187

Query: 185 LGTRFIVKREDDATRLSVLQSAVAAQPEALHQEQVFKEGQQVLMRSDGLGPLLAVTP--- 241
            GT+F V +  D  ++++++ +V    E          G Q         P L  +    
Sbjct: 188 TGTQFNVWKYQDQVKVTLVEGSVLVSSEGSAGGYRLGPGMQASYHKGDFEPQLEQSDDYG 247

Query: 242 ATDAWTRGMLVVDNARLGEVVEELSRYRTG-YLGVDKNVADLRITGSFPLHDTTLALNAL 300
            + AW  G LV+DN  L + +  ++RY     L  D +   +RI+G +   +    +N L
Sbjct: 248 NSLAWRSGKLVLDNLSLEQALPVINRYLDAPLLLADASTGRIRISGIYNTREVGRLVNNL 307

Query: 301 LPTLPVHI 308
              LPV++
Sbjct: 308 PKVLPVYL 315