Pairwise Alignments

Query, 331 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 328 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  136 bits (343), Expect = 6e-37
 Identities = 105/310 (33%), Positives = 152/310 (49%), Gaps = 19/310 (6%)

Query: 13  VLDAAIAWQLSLDSGDGSAIEREEFDKWLASDEEH-------ARAWRQLGMLD-QRFSVA 64
           V + A AW   +      A   ++   WLASDE H        R W+    +  Q     
Sbjct: 17  VREQAAAWFARVQDAPRDAGLHKQLHAWLASDEHHREEYEHLCRVWQAADFIPRQHLEAL 76

Query: 65  SGPARAALLQSREGIRQRVRKLGSGLASVALVIGLALFAGERYVPIHYWLADQRTATGEQ 124
             P     L  R  +RQ    L + +A VAL +G   ++G  ++ +++     +TA  E+
Sbjct: 77  CRPDPVQQLPRRRFMRQA---LAASVAVVALGLG---WSGWHHLQLNHQ-GSLQTAFNER 129

Query: 125 RTLKLSDGTLINLNTHSAIDVRFDEKRRLVVLQEGEILVETGHNDERPFYVQTRDGSLRA 184
           R ++L DG+ + LN ++ + V F   +R V L  GE++    H+  RPF V T  GS+  
Sbjct: 130 RQVELPDGSHLELNGNTQLQVEFSAGQRHVRLNAGEVMFSVAHDSNRPFVVDTAQGSVIV 189

Query: 185 LGTRFIVKREDDATRLSVLQSAVAAQPEALHQEQVFKEGQQVLMRSDGL--GPLLAVTPA 242
            GTRF V+ +  +TR++V Q +V  Q +     Q+   GQ   + + GL   P    T A
Sbjct: 190 TGTRFDVRLDPASTRVAVEQGSVRVQGKGDSPAQL-TAGQGSHIDAQGLVAAPYAVNTGA 248

Query: 243 TDAWTRGMLVVDNARLGEVVEELSRYRTGYLGV-DKNVADLRITGSFPLHDTTLALNALL 301
             AW +G LV DNA L EVV E SRYR   L V    VA LR++G+F  +DT   L AL 
Sbjct: 249 ITAWRQGKLVFDNATLAEVVAETSRYRRQPLRVAPGKVARLRLSGTFSTNDTDALLRALP 308

Query: 302 PTLPVHIEQH 311
             LPV I+ H
Sbjct: 309 SILPVAIKAH 318