Pairwise Alignments

Query, 331 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 318 a.a., putative transmembrane sensor from Pseudomonas putida KT2440

 Score =  174 bits (442), Expect = 2e-48
 Identities = 109/322 (33%), Positives = 172/322 (53%), Gaps = 8/322 (2%)

Query: 1   MTVISSRPVSARVLDAAIAWQLSL-DSGDGSAIEREEFDKWLASDEEHARAWRQLGMLDQ 59
           MTV  +RP   + +  AI W L L +SG   A++ ++  +W +S  E+ +AW+++  L +
Sbjct: 1   MTV--ARP-DTKTVRQAIQWMLRLRESGHDPALQ-QQCAQWRSSHHENEQAWQRMVHLHK 56

Query: 60  RFSVASGPARAALLQSREGIRQRVRKLGS-GLASVALVIGLALFAGERYVPIHYWLADQR 118
              + + P     LQ+ E  +QR+R+  +  L    ++ G A +  +    +  W +D  
Sbjct: 57  DLDLRAIPGAGLALQTLETSQQRLRRRQALKLLGGVVMAGSASWLAKDLDTVSAWTSDYA 116

Query: 119 TATGEQRTLKLSDGTLINLNTHSAIDVRFDEKRRLVVLQEGEILVETGHNDERPFYVQTR 178
           T TGE+R   L DG+L+ LNT SA+D+ F +++RLV L+ GE+++    N   P  V+TR
Sbjct: 117 TGTGERRVFTLPDGSLMQLNTCSAVDLAFHDQQRLVRLKLGELMINC--NPRHPLLVETR 174

Query: 179 DGSLRALGTRFIVKREDDATRLSVLQSAVAAQPEALHQEQVFKEGQQVLMRSDGLGPLLA 238
           D  L     RF+  ++ D TR+SV    VA       Q Q  + GQ   + + G   L  
Sbjct: 175 DALLEGFEGRFVAYQDSDCTRVSVSHGKVAIHRPGAGQLQWIEGGQNWRLDAQGAHRLAH 234

Query: 239 VTPATDAWTRGMLVVDNARLGEVVEELSRYRTGYLGVDKNVADLRITGSFPLHDTTLALN 298
           +     AWT G++V  + RL   + ++SRYR GYLG    +ADLR++G F L D    L 
Sbjct: 235 MDMDAMAWTEGLIVTQDMRLSNFLAQVSRYRHGYLGCSNEIADLRLSGVFRLEDPEQLLR 294

Query: 299 ALLPTLPVHIEQHTPWWVTVKA 320
            L  TLPV + + T WWV V++
Sbjct: 295 LLPQTLPVRLRRRTRWWVHVES 316