Pairwise Alignments

Query, 235 a.a., DNA polymerase III subunit epsilon from Pseudomonas simiae WCS417

Subject, 228 a.a., DNA polymerase III epsilon subunit from Pseudomonas sp. S08-1

 Score =  276 bits (706), Expect = 2e-79
 Identities = 145/232 (62%), Positives = 171/232 (73%), Gaps = 5/232 (2%)

Query: 3   LFNWLRKKKPGLDSAQQQRLAQLRSPTPLGNNTLRNQRWVVVDLETSGLNLNRDQVLSIG 62
           +  WLR+  P +D     R  +L +P  L    L  QR VVVDLETSGL+L RDQ+L+IG
Sbjct: 1   MLEWLRQSSPVVDP----RSLRLPAPAALDERPLARQRLVVVDLETSGLDLQRDQLLAIG 56

Query: 63  AVVIEDGAVDFSQLFERTLQRAETKLSPSVLIHGLGPSAIAAGSDPVDALLDFMDFVGDS 122
           AVVIEDGA+D SQ FE TL++A+ +  PS LIHG+ PSA+AAG +P DALLDFM FV DS
Sbjct: 57  AVVIEDGAIDLSQQFECTLRQADHRAGPSTLIHGIAPSAVAAGREPDDALLDFMQFVDDS 116

Query: 123 PLLAFHAPFDQHMLCRALKDSLGYRLTHPFLDVADIAPLLCPEAHIREAGLDDWINHFNL 182
           PLLAFHAPFDQHML RAL++ LGYRL HPFLD A +APLL PEA     GLD+W+ HF L
Sbjct: 117 PLLAFHAPFDQHMLERALREQLGYRLRHPFLDAAVLAPLLYPEAPPCR-GLDEWLEHFQL 175

Query: 183 HVGERHHASADALATAELMLILFSRARQQHIDTPQVLQERLSQWKRRQHAPS 234
              ERHHASADALATAEL LILFS+AR+Q +D+   LQ R   W+RRQ APS
Sbjct: 176 QASERHHASADALATAELALILFSKARRQGLDSLAELQHRAQAWRRRQLAPS 227