Pairwise Alignments

Query, 235 a.a., DNA polymerase III subunit epsilon from Pseudomonas simiae WCS417

Subject, 205 a.a., DNA polymerase III alpha subunit (EC 2.7.7.7) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 51.2 bits (121), Expect = 1e-11
 Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 14/183 (7%)

Query: 40  RWVVVDLETSGLNLNR-DQVLSIGAVVIEDG-AVDFSQLFERTLQRAETKLSPSVLIHGL 97
           R  V+D ET+G++  + D+   +  V+ E G  VD  Q    +L  A  ++ PS +    
Sbjct: 3   RIAVIDFETTGISPGQGDRATEVAIVITEQGRVVDRYQ----SLMNAGVRI-PSFITQLT 57

Query: 98  G-PSAIAAGSDPVDALL-DFMDFVGDSPLLAFHAPFDQHMLCRALKDSLGYRLTHPFLDV 155
           G  +A+   + P D ++ +   FVG+ P++A +A FD+      L +  G     PF   
Sbjct: 58  GITNAMIETAPPADTVMREAARFVGEVPMVAHNAAFDRRFWMAEL-ERAGAEAPQPFACT 116

Query: 156 ADIAPLLCPEAHIREAGLDDWINHFNL-HVGERHHASADALATAELMLILFSRARQQH-I 213
             ++  L PEA   + G    ++ F L   G+ H A ADA   AEL+  +    R +H +
Sbjct: 117 VLLSRRLYPEAPSHKLG--SLVDFFRLPRTGQAHRALADAEMAAELLGRIQHDLRARHGV 174

Query: 214 DTP 216
           D P
Sbjct: 175 DEP 177