Pairwise Alignments

Query, 589 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

Subject, 601 a.a., putative Acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  807 bits (2085), Expect = 0.0
 Identities = 397/599 (66%), Positives = 473/599 (78%), Gaps = 10/599 (1%)

Query: 1   MPEYKAPLRDMRFLIDNVFDFHGHYAAL-GATDASPDMVSAILEEGAKFCENVLAPLNRS 59
           MP+YKAPLRD+RF+ D +  +  HY +L G  DA+PDMV AILEEGAKFCE VL+PLNR 
Sbjct: 1   MPDYKAPLRDIRFVRDELLGYEAHYQSLPGCQDATPDMVDAILEEGAKFCEQVLSPLNRV 60

Query: 60  GDEEGCHFENGVVTTPKGFKEAFAQYVEGGWHGVAADPAYGGQGLPQSLGLVLSEMIGSS 119
           GD+EGC +    V TP GFKEA+ Q+VEGGW  +A D  +GGQGLP+SLGL LSEM+G S
Sbjct: 61  GDQEGCTWSESGVKTPTGFKEAYQQFVEGGWPSLAHDVEHGGQGLPESLGLALSEMVGGS 120

Query: 120 NTSWGMYPGLTHGAMSAIHAHGTAEQKDTFLSKLTAGEWTGTMCLTEAHCGTDLGLIKTR 179
           N SWGMYPGL+HGAM+ I AHGTAEQ+ T+L+KL +GEWTGTMCLTE HCGTDLG+++T+
Sbjct: 121 NWSWGMYPGLSHGAMNTISAHGTAEQQHTYLTKLVSGEWTGTMCLTEPHCGTDLGMLRTK 180

Query: 180 AVPQADGSYAVTGSKIFISAGEHDMSANIIHLVLAKLPDAPAGTKGISLFIVPKFHADS- 238
           A PQADGSY V+G+KIFISAGEHDM+ NI+H+VLA+LPDAPAGTKGISLFIVPKF  ++ 
Sbjct: 181 AEPQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIVPKFLPNAE 240

Query: 239 ---GERNAVHCGSIEHKMGIKGSATCVLNFDGAKGFLIGEANKGLNCMFTMMNHARLGTG 295
              GERN V CGSIEHKMGI G+ATCV+NFD A G+LIG ANKGLNCMFT MN ARLGT 
Sbjct: 241 GGVGERNGVSCGSIEHKMGIHGNATCVMNFDAATGYLIGPANKGLNCMFTFMNTARLGTA 300

Query: 296 MQGLCNGEASFQGAIKYANDRLQMRSLTGAKAPDKAADPIIVHPDVRRMLLTMKAFNEGN 355
           +QGL + E +FQG +KYA +RLQMRSLTG KAPDKAADPIIVHPDVRRMLLTMKAF EGN
Sbjct: 301 LQGLAHAEVAFQGGLKYARERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAEGN 360

Query: 356 RALTYFTAQLLDTAHLSSDATQRQDAEDLLAFLTPICKAFMTDTGLEVTNHGMQVFGGHG 415
           RA+ YFTA+ +D    S D  +R+ A+ LLAFLTPI KAFMT+ G E  NHG+Q++GGHG
Sbjct: 361 RAMVYFTAKQVDIVKYSQDEEERKKADALLAFLTPIAKAFMTEVGFEAANHGVQIYGGHG 420

Query: 416 YIREWGMEQLARDARIAPIYEGTNGIQALDLLGRKVLGSQGKLLRGFTKIVHKFCAAHAE 475
           +I EWGMEQ  RD+RI+ +YEGT GIQALDLLGRKVL +QG+ L+GFTKIVHKFC A   
Sbjct: 421 FIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTKIVHKFCQAQEG 480

Query: 476 HPQLKAYVAQLNQLNGEWGELTTKVGMAAMKNPDEVGAAAVDYLMYSGYVVLAYLWLRMA 535
           +  +K +V  L  +N EWGELT KVGMAAMK+ +EVGAA+VDYLMYSGY  LAY W  +A
Sbjct: 481 NEAVKEFVEPLAAINKEWGELTMKVGMAAMKDREEVGAASVDYLMYSGYACLAYFWADIA 540

Query: 536 IAAAEQ-----PDTDFAKAKLATCDFYFKRLLPRTATHRAAVEAGSECLMSLPAEAFAL 589
             AAE+      +  F  AKL T  FYF+R+LPRT TH A + +G+  LM++  E F L
Sbjct: 541 RLAAEKLAAGTSEEAFYTAKLQTARFYFQRILPRTRTHVATMLSGANNLMAMDEEHFGL 599