Pairwise Alignments

Query, 592 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) from Pseudomonas simiae WCS417

Subject, 600 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

 Score =  361 bits (927), Expect = e-104
 Identities = 231/596 (38%), Positives = 316/596 (53%), Gaps = 16/596 (2%)

Query: 9   RDMRFVLNEVFEVATTWAQLPALADTVDAETVEAILEEAGKVTAKSIAPLSRGGDEQGCR 68
           R++ F L EV + A      P  A+    ET +A L  A  +  K  AP +R  DE   R
Sbjct: 9   RNLAFELYEVLD-AEALTLRPRFAEH-SRETFDAALTTARTIAEKYFAPHNRKADENEPR 66

Query: 69  W-DNTAVFTPDGFPQAYATYAQGGWVGVGGDPIFGGMGMPKAVSAQVEEMINSSSLAFGL 127
           + D  A   P+  P A   + + G++    D   GGM +P  VS        +++     
Sbjct: 67  YVDGRAELIPEVKP-AVDAFLEAGFLNANRDFEVGGMQLPSLVSQACIAHFQAANAGTTA 125

Query: 128 YPMLTSGACVSINTHASEALKATYLPKMYSGEWSGSMCLTEAHAGTDLGIIRTKAEPQAD 187
           YP LT GA   I +  S+  K  +L  M  G + G+M LTE HAG+ L  IRT+AEP  D
Sbjct: 126 YPFLTMGAANLIESFGSDEQKRLFLQPMIDGRYFGTMALTEPHAGSSLADIRTRAEPAGD 185

Query: 188 GSYKVSGTKIFITGGEHDLTDNIIHLVLAKLPDAPAGPKGISLFLVPKFMVNADGSLGAR 247
           GSY++ G KIFI+GG+H+L++NI+H+VLAKLPDAP G KGISLF+VPK+ VN +GS G R
Sbjct: 186 GSYRLKGNKIFISGGDHELSENIVHMVLAKLPDAPPGVKGISLFIVPKYHVNPNGSRGPR 245

Query: 248 NTVSCGSIEHKMGIQASATCVMNF---DEAVGYLVGEPNRGLAAMFTMMNYERLGVGIQG 304
           N V    + HKMG + + +  +NF    + VGYLVG+P++GLA MF MMN  R+GVG+  
Sbjct: 246 NDVLLAGLFHKMGWRGTTSTALNFGDNGQCVGYLVGQPHQGLACMFQMMNEARIGVGMGA 305

Query: 305 LASGERSYQNAIEYARDRLQSRAPTGAQAQDKMADPIIVHPDVRRMLLTMKAANEGGRAF 364
           +  G   Y  ++EYAR R Q R P         A PII H DV+RMLL  KA  EG    
Sbjct: 306 VMLGYAGYLYSLEYARQRPQGRLPDNKDPHSP-AVPIIEHTDVKRMLLAQKAYVEGAFDL 364

Query: 365 STYVATQLDIAKFSDDAAARERADNLVALLTPVAKAFLSDLGLETTVLGQQVFGGHGYIR 424
             Y A   D    + D  AR+ A +L+ LLTP+ K++ S   L+   L  Q+ GGHGY R
Sbjct: 365 GLYAARLFDDTHTAPDENARKPAQDLLDLLTPIVKSWPSAFCLKANELAIQILGGHGYTR 424

Query: 425 EWGQEQLVRDVRITQIYEGTNGIQALDLMGRKIVGSGGAFYTLFADEIRGFI--ASSGTE 482
           E+  EQ  RD R+  I+EGT GIQ+LDL+GRK+    GA        I      AS    
Sbjct: 425 EYPVEQYYRDNRLNPIHEGTEGIQSLDLLGRKLAQHNGAGLKQLIRLIAATCERASHHPN 484

Query: 483 LAEFTKPLSAAVDNLDELTAWVL-DRAKTNPNEIGAASVEYLHAFGYMAYAYMWARMAKA 541
           L    +PL    + L  +T  +L D A+       A S  YL AFG+    + W   A  
Sbjct: 485 LDPLRQPLEQLANRLQGVTLALLGDLAQGKVAGALANSALYLKAFGHCVIGWRWLEQAVH 544

Query: 542 A-----LGKESEEDFYASKLGTARFYFARLLPRIHSLSASVKAGSESLFLLDEALF 592
           A      G  ++ DFY  KL  AR++    +P  H+  A ++A  ++   + +  F
Sbjct: 545 AELGMLKGTAADRDFYLGKLQAARYFLTWEVPGCHNELALLEAHDDTCLGMQDGWF 600