Pairwise Alignments

Query, 592 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) from Pseudomonas simiae WCS417

Subject, 591 a.a., putative acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  574 bits (1479), Expect = e-168
 Identities = 299/596 (50%), Positives = 397/596 (66%), Gaps = 14/596 (2%)

Query: 3   DYKAPLRDMRFVLNEVFEVATTWAQLPALADTVDAETVEAILEEAGKVTAKSIAPLSRGG 62
           +Y+APLRDMRFVL+E+F+++    QL      +D +T++ ILEEA + T + IAPL+R  
Sbjct: 2   NYQAPLRDMRFVLHELFDLSGHCQQLGI---ELDRDTLDGILEEAARFTGQIIAPLNRNS 58

Query: 63  DEQGCRWDNTAVFTPDGFPQAYATYAQGGWVGVGGDPIFGGMGMPKAVSAQVEEMINSSS 122
           DEQGC+W    V TPDG   AY  Y + GW  + G   +GG G+P+  SA   EM+ ++S
Sbjct: 59  DEQGCQWVGGEVTTPDGMRDAYRQYVEHGWASMTGPQAYGGQGLPQMASASFHEMLMAAS 118

Query: 123 LAFGLYPMLTSGACVSINTHASEALKATYLPKMYSGEWSGSMCLTEAHAGTDLGIIRTKA 182
           L+F +Y  LT GA ++++ H SE LK  YL +M SGEW+G+MCLTE  AGTDL ++RT+A
Sbjct: 119 LSFRIYSGLTEGAVLALHRHGSEPLKQAYLSRMVSGEWAGTMCLTEPQAGTDLALLRTRA 178

Query: 183 EPQADGSYKVSGTKIFITGGEHDLTDNIIHLVLAKLPDAPAGPKGISLFLVPKFMVNADG 242
           +P+ADGSY+++G+KIFI+GGE DLTDNI+HLVLA+LPDAPAG +GISLFLVPK +     
Sbjct: 179 QPEADGSYRITGSKIFISGGEQDLTDNIVHLVLARLPDAPAGVRGISLFLVPKLLPG--- 235

Query: 243 SLGARNTVSCGSIEHKMGIQASATCVMNFDEAVGYLVGEPNRGLAAMFTMMNYERLGVGI 302
             G RN + CG++EHKMGI+ ++TCVMNFD A G+LVGE N+GLA MFTMMN  R  VG+
Sbjct: 236 --GERNALGCGALEHKMGIKGASTCVMNFDGAQGWLVGEANQGLACMFTMMNDARFQVGL 293

Query: 303 QGLASGERSYQNAIEYARDRLQSRAPTGAQAQDKMADPIIVHPDVRRMLLTMKAANEGGR 362
           QGL   E ++Q  + YAR+RLQSR+  G  A +K ADPIIVHPDVRRMLLT K   EG R
Sbjct: 294 QGLGIAEAAFQGGLAYARERLQSRSLAGPVAAEKPADPIIVHPDVRRMLLTQKTLTEGCR 353

Query: 363 AFSTYVATQLDIAKFSDDAAARERADNLVALLTPVAKAFLSDLGLETTVLGQQVFGGHGY 422
               Y A QLD+   +  A AR+ A    ALL P+ KAF +D+G E   LG QV+GGHGY
Sbjct: 354 MLGIYTARQLDLEHAAKSAPARQAAARRAALLIPIVKAFFTDVGQEVASLGVQVYGGHGY 413

Query: 423 IREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKIVGSGGAFYTLFADEIRGFIASSGT- 481
           IREWG EQL+RD RITQ+YEGTNGIQALDL+ RK++G GGA   L  DE+   + ++   
Sbjct: 414 IREWGMEQLMRDSRITQLYEGTNGIQALDLIRRKVLGDGGAELNLLIDEMAPHVRAANAL 473

Query: 482 -ELAEFTKPLSAAVDNLDELTAWVLDRAKTNPNEIGAASVEYLHAFGYMAYAYMW---AR 537
             L      +   ++    L+  V++  + +P E GA SV++L    Y+  A MW   A 
Sbjct: 474 GGLQAMATGVGQRLEEWRALSGHVVEACERDPQESGAVSVDFLAYSAYVLLAAMWLQAAV 533

Query: 538 MAKAALGKESEED-FYASKLGTARFYFARLLPRIHSLSASVKAGSESLFLLDEALF 592
            A+A L   S E  FY +KL  A FY+ R+LPR  +   ++  G++ L  L  + F
Sbjct: 534 RAQATLATGSAETAFYRAKLDAATFYWRRILPRATAHREALLGGADCLMALPASDF 589