Pairwise Alignments

Query, 592 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) from Pseudomonas simiae WCS417

Subject, 594 a.a., acyl-CoA dehydrogenase from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  435 bits (1118), Expect = e-126
 Identities = 253/596 (42%), Positives = 344/596 (57%), Gaps = 29/596 (4%)

Query: 4   YKAPLRDMRFVLNEVFEVATTWAQLPALADTVDAETVEAILEEAGKVTAKSIAPLSRGGD 63
           Y+AP+RD+ F L  V  +A   A   A  D  DA+   A+LE AG+ + + +APL+R GD
Sbjct: 3   YRAPVRDLAFTLESVAGMADV-AATGAFPD-YDADVAGAVLEAAGQFSEEVLAPLNRIGD 60

Query: 64  EQGCRWDNTAVFTPDGFPQAYATYAQGGWVGVGGDPIFGGMGMPKAVSAQVEEMINSSSL 123
           ++G  + N AV    GF  AY  +A GGW G+      GG  +PKA+     E ++++++
Sbjct: 61  QKGSTYANGAVTAAPGFADAYRQFAAGGWTGLSASTEAGGQALPKALELAAYETVHAANM 120

Query: 124 AFGLYPMLTSGACVSINTHASEALKATYLPKMYSGEWSGSMCLTEAHAGTDLGIIRTKAE 183
           AFGL PML+  +  ++    +E  KA YL K+ SGEW+G+M LTE  AG+DLG + T A 
Sbjct: 121 AFGLCPMLSLASIEALEQVGTEEQKAKYLTKLVSGEWTGAMVLTEPGAGSDLGSLITTAT 180

Query: 184 PQADGSYKVSGTKIFITGGEHDLTDNIIHLVLAKLPDAPAGPKGISLFLVPKFMVNADGS 243
           P  DG+Y ++G KI+IT G+HD TDNI+HLVLA+LPDAP GPKGISLFL  KF V  DG+
Sbjct: 181 PNGDGTYALNGQKIYITWGDHDATDNIVHLVLARLPDAPKGPKGISLFLASKFAVKEDGT 240

Query: 244 LGARNTVSCGSIEHKMGIQASATCVMNFDEAVGYLVGEPNRGLAAMFTMMNYERLGVGIQ 303
           LG RN      +EHK+GI AS TCVM+++ A   LVG+PN+GLA MF MMN  RL VG++
Sbjct: 241 LGDRNAFRPVGVEHKLGIHASPTCVMSYEGATAELVGQPNQGLAHMFVMMNAARLAVGVE 300

Query: 304 GLASGERSYQNAIEYARDRLQSRAPTGAQAQDKMADPIIVHPDVRRMLLTMKAANEGGRA 363
           G+   ER+YQ+A+ YA DR Q R+    +A      PI  HPDVRRML  MKA     RA
Sbjct: 301 GVGIAERAYQHALAYALDRRQGRSVWTGEAN----APIFDHPDVRRMLSVMKAKISAARA 356

Query: 364 FSTYVATQLDIAKFSDDAAARERADNLVALLTPVAKAFLSDLGLETTVLGQQVFGGHGYI 423
                    D+A+ +     R        L TP+AKA+ +D+G E   +G Q+ GG G+I
Sbjct: 357 VCLSTGVAADLARHAGTDEERRHWKGREDLFTPIAKAWSTDIGCEVASMGVQIHGGMGFI 416

Query: 424 REWGQEQLVRDVRITQIYEGTNGIQALDLMGRKIVGSGGAFYTLFADEIRGFIASSGTEL 483
            E G  Q  RD RI  IYEGTNGIQA+DL+GRK+   GG       D  +  IA     L
Sbjct: 417 EETGAAQYYRDARIAPIYEGTNGIQAMDLVGRKLSMDGG-------DSAKALIADMKVTL 469

Query: 484 AEFTKPLS--------AAVDNLDELTAWVLDRAKTNPN---EIGAASVEYLHAFGYMAYA 532
            +  K  S         A++ +++ T W+LD+ K +PN   ++ AA+  YL   G +A  
Sbjct: 470 VDLGKLYSGKPVERFATAIEAVEDATLWLLDQ-KADPNAAADVLAAADAYLKLLGDVAGG 528

Query: 533 YMWARMAKAALGKESEED----FYASKLGTARFYFARLLPRIHSLSASVKAGSESL 584
           +M A+ A AA  K    D    +   KL     Y A +L  + S  A+V  G + L
Sbjct: 529 WMLAKGALAAKAKLDANDGDPVWLQGKLDLYEVYAANVLGHVSSRLAAVGQGGDLL 584