Pairwise Alignments

Query, 592 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) from Pseudomonas simiae WCS417

Subject, 594 a.a., acyl-CoA dehydrogenase from Agrobacterium fabrum C58

 Score =  455 bits (1170), Expect = e-132
 Identities = 263/594 (44%), Positives = 354/594 (59%), Gaps = 22/594 (3%)

Query: 4   YKAPLRDMRFVLNEVFEVATTWAQLPALADTVDAETVEAILEEAGKVTAKSIAPLSRGGD 63
           Y AP+ D+ F L  V  +    +Q   +   +  + V+AILEEAG+     +APL+  GD
Sbjct: 2   YSAPVDDIAFTLKHVAGLEDALSQ--GVLGDLSEDLVDAILEEAGRFATGEVAPLADIGD 59

Query: 64  EQGCRWDNTAVFTPDGFPQAYATYAQGGWVGVGGDPIFGGMGMPKAVSAQVEEMINSSSL 123
            QG +  +  V TPDG+   Y  +A+ GW  +     FGG  +P  ++    EM NS S+
Sbjct: 60  RQGAKLADGKVTTPDGWADLYRRWAEAGWNSLTAPEEFGGQNLPHMLNVAALEMWNSGSM 119

Query: 124 AFGLYPMLTSGACVSINTHASEALKATYLPKMYSGEWSGSMCLTEAHAGTDLGIIRTKAE 183
           AF L P LT GA  +I TH S  LK  YLPK+ SGEW+G+M LTE HAG+DLG+++T+AE
Sbjct: 120 AFALAPTLTMGAVEAIVTHGSNDLKRIYLPKLVSGEWTGTMNLTEPHAGSDLGVLKTRAE 179

Query: 184 PQADGSYKVSGTKIFITGGEHDLTDNIIHLVLAKLPDAPAGPKGISLFLVPKFMVNADGS 243
              DG+Y++ G KIFIT GEHD  DNIIHLVLA+LPDAP G +GISLFLVPKF+ + +G+
Sbjct: 180 RNGDGTYRIFGQKIFITWGEHDAADNIIHLVLARLPDAPTGTRGISLFLVPKFLPDENGA 239

Query: 244 LGARNTVSCGSIEHKMGIQASATCVMNFDE--------AVGYLVGEPNRGLAAMFTMMNY 295
            G+RN + C S+EHK+GI  S TC M F +        A+G+L+GE N+GLA MFTMMN 
Sbjct: 240 PGSRNDLFCHSLEHKLGIHGSPTCTMIFGDGKFGDEKGALGWLIGEENKGLACMFTMMNN 299

Query: 296 ERLGVGIQGLASGERSYQNAIEYARDRLQSRAPTGAQAQDKMADPIIVHPDVRRMLLTMK 355
            RL VG+QG+A  E + Q AIEYA++R Q +AP     Q     PII HPD+ R LLTMK
Sbjct: 300 ARLAVGMQGVAICEAATQKAIEYAKERTQGKAPGW---QGSGMSPIIEHPDIARTLLTMK 356

Query: 356 AANEGGRAFSTYVATQLDIAKFSDDAAARERADNLVALLTPVAKAFLSDLGLETTVLGQQ 415
           A  +G RA S   A  +D+A  ++DA+ R       ALLTP+AK+F +D G++   +G Q
Sbjct: 357 ALTQGSRAISFSCAHAIDMAHATEDASQRAHWQERAALLTPIAKSFSTDAGVDVASMGIQ 416

Query: 416 VFGGHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKIVGSGGAFYTLFADEIRGF 475
           V GG G+I E G  + +RD RI  IYEGTNGIQA+DL+ RK+  S GA    F  E+R  
Sbjct: 417 VHGGMGFIEETGAARYLRDARIAPIYEGTNGIQAIDLVLRKLPLSEGAQVRGFIAELREI 476

Query: 476 ----IASSGTELAEFTKPLSAAVDNLDELTAWVLDRAKTNPNEIG-AASVEYLHAFGYMA 530
                AS+  +L E  + L A++++L+  T W+L R K    E   A +  Y   FG   
Sbjct: 477 AARTAASNRDDLGETARYLEASLNDLETTTDWLLSRIKAGETETALAGATAYQRLFG--- 533

Query: 531 YAYMWARMAKAALGKESEEDFYASKLGTARFYFARLLPRIHSLSASVKAGSESL 584
            A   A +AK AL    ++     +    RF    LL    +L   V +G+ SL
Sbjct: 534 LALTGAYLAKGAL-VSVDDGRSGHRAALCRFTAENLLAETAALKDRVISGAASL 586