Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 307 a.a., Transcriptional regulator ligR, LysR family from Variovorax sp. SCN45

 Score =  121 bits (304), Expect = 2e-32
 Identities = 92/307 (29%), Positives = 150/307 (48%), Gaps = 13/307 (4%)

Query: 1   MDFKQLRYFVAVYEEGHVGRAAERLSISQPALSQQIRQLEQNLDVSLFERSSKRLLPTLA 60
           MD KQL YF+ V E G   RA+  + I+QPALS+Q+RQLE  L  +L  R+ + ++PT A
Sbjct: 1   MDLKQLEYFIRVAELGSFTRASTVIDIAQPALSRQVRQLEVELRQNLLVRNGRGVVPTDA 60

Query: 61  AHTLYNHALPLIDGMQQAVEALRNFKGQAMRTLAIGVLQTVHTSLVPQMLERVRKAQPHL 120
              L  H   ++  +++A E +   +G     +A+G+  +V   L   ++  VR+  P  
Sbjct: 61  GKRLLEHGRGILHQVERAKEDMGRMRGALAGRVAVGLPPSVAGVLTVPLVRSVRERLPDA 120

Query: 121 VVQIYELTGLEIERRLLNGSLDIGISYLPPRQPGLHGVLLYEDELKVV--IPEDHPLRAF 178
            + I E     ++  LL G LDI + Y P     +    + E+EL +V  I      R  
Sbjct: 121 ALSITESLSTAMQESLLTGRLDIALLYNPQPSTDVDSETVLEEELFLVSAIKGTGRGRRG 180

Query: 179 KKVSLKQAAELPMLLLGEEFQVRQIWQGQLSNLGRRPQVQAELNTMVGIL----DSLPHT 234
             ++L Q A+ P+++      +R + + QL  +GRRP +  E++ +  IL    D   H 
Sbjct: 181 APLALAQLADQPLVIPTRPNAIRMLVEAQLGAIGRRPSIALEIDGVPAILALVADGAGHA 240

Query: 235 KLATVLPGRSQDEHNSQSLLWKPLSEPRVPLKVGLVC---RDVQRQQATMA-LLRTLLED 290
            L+      ++    SQ    +P++EP +  ++ L     R V R Q  M  LLR L+E 
Sbjct: 241 VLSRNAVAIAE---RSQRYAIRPIAEPGLRSRLALAASSQRPVTRTQRAMGELLRELVEQ 297

Query: 291 VMNAPQA 297
            + A  A
Sbjct: 298 YLGAGAA 304