Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 296 a.a., Hca operon transcriptional activator HcaR from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  105 bits (263), Expect = 1e-27
 Identities = 62/185 (33%), Positives = 100/185 (54%), Gaps = 1/185 (0%)

Query: 1   MDFKQLRYFVAVYEEGHVGRAAERLSISQPALSQQIRQLEQNLDVSLFERSSKRLLPTLA 60
           M+ + LRYFVAV +  +  RAAE+L  SQP+LS QIR LE  + V L  R  +++  T A
Sbjct: 1   MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVGVPLLVRDKRKVALTAA 60

Query: 61  AHTLYNHALPLIDGMQQAVEALRNFKGQAMRTLAIGVLQTVHTSLVPQMLERVRKAQPHL 120
                  AL +++  + A    R    Q  R L IG + +   +L+P++L   R  QP  
Sbjct: 61  GECFLQDALAILEQAENAKLRARKIV-QEDRQLTIGFVPSAEVNLLPKVLPMFRLRQPDT 119

Query: 121 VVQIYELTGLEIERRLLNGSLDIGISYLPPRQPGLHGVLLYEDELKVVIPEDHPLRAFKK 180
           ++++  L   + E ++  G LD+G+   P   P +  + L+++ L VV+P DHPL   K+
Sbjct: 120 LIELVSLITTQQEEKIRRGELDVGLMRHPVYSPEIDYLELFDEPLVVVLPVDHPLAHEKE 179

Query: 181 VSLKQ 185
           ++  Q
Sbjct: 180 ITAAQ 184