Pairwise Alignments

Query, 780 a.a., pyrroloquinoline quinone biosynthesis protein PqqF from Pseudomonas simiae WCS417

Subject, 962 a.a., protease III (NCBI) from Escherichia coli BW25113

 Score =  109 bits (272), Expect = 8e-28
 Identities = 71/229 (31%), Positives = 116/229 (50%), Gaps = 4/229 (1%)

Query: 12  LTLANGLQVALQHAPRLKRCAAVLRVAAGSHDVPLAWPGLAHFLEHLLFLGTERFPTSEG 71
           + L NG+ V L   P+  +  + L V  GS + P A+ GLAH+LEH+  +G++++P ++ 
Sbjct: 47  IRLDNGMVVLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQADS 106

Query: 72  LMAYVQRHGGQVNASTRERTTDFFFELPVATFAGGLERLGDMLTHPRLALEDQLREREVV 131
           L  Y++ HGG  NAST    T F+ E+      G ++RL D +  P L  +   RER  V
Sbjct: 107 LAEYLKMHGGSHNASTAPYRTAFYLEVENDALPGAVDRLADAIAEPLLDKKYAERERNAV 166

Query: 132 HAEF-VAWSQDAKAQQQVALLEGLAADHPLRGFHAGNRDSLPVE-REAFQQALREFHAQF 189
           +AE  +A ++D     QV+  E +   HP   F  GN ++L  +     QQAL++FH ++
Sbjct: 167 NAELTMARTRDGMRMAQVS-AETINPAHPGSKFSGGNLETLSDKPGNPVQQALKDFHEKY 225

Query: 190 YQSGQMTLSLAGPQSLEALQGL-AQSFSEQLTSGPLRPQSAPPALMPGQ 237
           Y +  M   +   + L  L  + A +F         +P+   P +   Q
Sbjct: 226 YSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKKPEITVPVVTDAQ 274



 Score = 43.1 bits (100), Expect = 7e-08
 Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 5/123 (4%)

Query: 603 SDEAALLLFCQAPSQSLADEAAWRLLGHLVQGPFYQRLRVELQIGYAVFSGIRQISGQTG 662
           +D A   +F           A   LLG +VQ  FY +LR E Q+GYAVF+    +  Q G
Sbjct: 754 TDSALAAVFVPTGYDEYTSSAYSSLLGQIVQPWFYNQLRTEEQLGYAVFAFPMSVGRQWG 813

Query: 663 LLFGVQSPSVSLEGIADHLQAFLQQLPALI-----DSSDDLGNLALAQQFSAQTLPNAQA 717
           + F +QS       + +  +AF     A +     D    +    + Q   A      +A
Sbjct: 814 MGFLLQSNDKQPSFLWERYKAFFPTAEAKLRAMKPDEFAQIQQAVITQMLQAPQTLGEEA 873

Query: 718 AEL 720
           ++L
Sbjct: 874 SKL 876