Pairwise Alignments

Query, 657 a.a., DNA primase from Pseudomonas simiae WCS417

Subject, 660 a.a., DNA primase from Pseudomonas putida KT2440

 Score = 1029 bits (2660), Expect = 0.0
 Identities = 516/667 (77%), Positives = 570/667 (85%), Gaps = 19/667 (2%)

Query: 1   MAGLIPQSFIDDLLNRTDIVDVVSSRVQLKKAGKNYTACCPFHKEKTPSFSVSPDKQFYY 60
           MAGLIPQSFIDDL+NR DIVDVVSSRVQLKK GKNY+ACCPFHKEKTPSF+VSPDKQFYY
Sbjct: 1   MAGLIPQSFIDDLINRLDIVDVVSSRVQLKKTGKNYSACCPFHKEKTPSFTVSPDKQFYY 60

Query: 61  CFGCGAGGNALGFLMDHDNLDFPQAIEDLAKAAGMEVPREESGRPHKPRQPTDSPLYPLL 120
           CFGCGAGGNALGF+MDHDNLDFPQA+E+LA+AAGMEVPRE+  R  KPRQPTDSPLYPLL
Sbjct: 61  CFGCGAGGNALGFVMDHDNLDFPQAVEELARAAGMEVPREQGRRDQKPRQPTDSPLYPLL 120

Query: 121 TAAADFYRQALKSHPQRKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLYKHLSSDTLQQ 180
            AA++FYRQAL+SHP RKAAVDYLKGRGL+GEIARDFGLGFAPPGWDNL KHL +DTLQQ
Sbjct: 121 DAASEFYRQALRSHPSRKAAVDYLKGRGLSGEIARDFGLGFAPPGWDNLLKHLGADTLQQ 180

Query: 181 KAMIDAGLLVENAETGKRYDRFRDRVMFPIRDSRGRIIAFGGRVLGDDKPKYLNSPETPV 240
           K MIDAGLL+ENAE+GKRYDRFRDRVMFPIRDSRGRIIAFGGRVLGDDKPKYLNSPETPV
Sbjct: 181 KVMIDAGLLIENAESGKRYDRFRDRVMFPIRDSRGRIIAFGGRVLGDDKPKYLNSPETPV 240

Query: 241 FHKGQELYGLFEARKHNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHMKRLF 300
           FHKGQELYGL+EARKHNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEH+KRLF
Sbjct: 241 FHKGQELYGLYEARKHNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHLKRLF 300

Query: 301 RVVPSVLFCFDGDQAGRNAAWRALEATLSSLQDGRRARFLFLPEGEDPDTLVRSEGTDAF 360
           RVVPSVLFCFDGDQAGR AAWRALE+TLS+LQDGRRARFLFLPEGEDPD+LVR+EGTDAF
Sbjct: 301 RVVPSVLFCFDGDQAGRKAAWRALESTLSNLQDGRRARFLFLPEGEDPDSLVRAEGTDAF 360

Query: 361 RARINQHAQPLADYFFQQLTEEADPRSLEGKAHMATLAAPLIDKVPGANLKSLMRMRLQE 420
            ARINQH+QPLADYFF+QL  EADPRSLEGKAHMATLAAPLI+K+PGANL+ LMR RL+E
Sbjct: 361 MARINQHSQPLADYFFEQLGVEADPRSLEGKAHMATLAAPLIEKIPGANLRQLMRNRLKE 420

Query: 421 ITGLSGEAVSQLVHNTPHDAPPPAYDPGMDYDAM----PDYSDFHQPQEAYAP---QQEW 473
           ITGL  + V QL    P  +  P YDPG DYDAM    PDY D   PQ  YAP   +Q W
Sbjct: 421 ITGLDPQQVEQLAQQAPATSSMPDYDPGYDYDAMASYTPDYGD--MPQHDYAPVHQEQAW 478

Query: 474 TPKKSGNDGKKWEKKPWSKNGKRG----DRDEAYAPRTPVAVEAPTLIALRTLIHHPQLA 529
            P K G+  K W  KPW KN K G     RDEA  PR P  VE PTL ALRTL+HHP LA
Sbjct: 479 KPNKGGSK-KPWSDKPWDKNRKGGKPWQQRDEA-PPRVPAPVEPPTLAALRTLLHHPLLA 536

Query: 530 EKVESADHFANASNTYAQVLIALIEAVQKNPKLNSIQLMARWHGTEQGRLLKALAEKEWL 589
            KVE A HFA+  + Y+Q+L+ALIEA QKNP L+S+QL+ARWHGTEQGRLL+ALAEKEWL
Sbjct: 537 GKVEDASHFADEEHLYSQLLVALIEAAQKNPGLSSMQLIARWHGTEQGRLLRALAEKEWL 596

Query: 590 IDGDNLEQQFLDTITRLSAGQHTQTLDELIKKARQPGLSAEEQIQIAKQMRDLLKQNVSA 649
           I  DNLEQQF DTIT LSA Q  ++L++L++K+RQ  L++EE+ Q+      LL +NV A
Sbjct: 597 IVADNLEQQFFDTITSLSARQRERSLEQLLRKSRQSELTSEEKTQLLA----LLSRNVPA 652

Query: 650 SNPTSAG 656
             PTS+G
Sbjct: 653 QTPTSSG 659