Pairwise Alignments

Query, 936 a.a., LPS biosynthesis protein from Pseudomonas simiae WCS417

Subject, 790 a.a., LPS assembly protein LptD from Rhodanobacter sp000427505 FW510-R12

 Score =  360 bits (923), Expect = e-103
 Identities = 244/803 (30%), Positives = 368/803 (45%), Gaps = 104/803 (12%)

Query: 145 DKTNKSDAPTFIGAKASRYEQEQQVATLAGDVVMRQGSMQLESEEASLYQAENRGELNGK 204
           D + +  +PT + A+       Q V  L+G+V +++   QL++E           +  G 
Sbjct: 74  DASLRETSPTLVQAQHVD-SSNQSVYHLSGEVKLQRADQQLQAERIDYNDQNTDYDARGN 132

Query: 205 VRLRDNGALIVGDHAEVQLDTGAAQIDNAEYVLHKSRIRGNALYAKRAENAIIRLKDGTY 264
           VR ++ G L+         +      ++  Y +  +R  G A   +  +    R    TY
Sbjct: 133 VRYQEAGQLLAASSMRGNTEASRGTANDVRYQMLDARGNGTASQGQMLDAQHSRYSQATY 192

Query: 265 TTCEPDSNAWQLRGNNITLNPATGFGTATNATLRIKNIPILYTPYIYFPIDDRRQSGFLP 324
           +TC+   + W+ R  +IT+N  TG G A NAT+R+ N+P LY PY  FP+DDRR++GFL 
Sbjct: 193 STCDVGHHLWEFRAKSITINKETGVGVARNATMRLGNVPFLYLPYFSFPVDDRRKTGFLY 252

Query: 325 PSFSTGSETGFTLVTPYYFNLAPNYDATLYPQYMTKRGLLMEGEFRYLTKSSEGQFGGAY 384
           P+    S +G+ + TPYY NLAPNYDATL P+Y + RG ++ GEFRYLT  S GQ    Y
Sbjct: 253 PTVGHTSRSGYEISTPYYLNLAPNYDATLDPRYYSARGAMLAGEFRYLTAGSRGQLNVEY 312

Query: 385 LNDDNDERSKQTDYEKTRYMLNWQHRGGLDSRLATQVDYTRISDPYYFQDLKSFQEGVES 444
           + DD                     RGG D    T+ D   + +   F D      G + 
Sbjct: 313 VPDD---------------------RGGNDGLAVTKGDSRYLVN---FSDSTQLWRGWQF 348

Query: 445 RDALNQQGSVTYRGDSYQARLNVQAYQLATISQI-------------TPYDRLPQITFNG 491
             + N     +Y  D   A  +   Y LA+ + I             T Y  +     + 
Sbjct: 349 VGSYNHASDSSYLYDYGDALSHSAVYTLASNAAIMGGGKWWNASFGGTIYQNVNPFVTDY 408

Query: 492 ALPYHPGGLNFTYETEAVRFERSLEKGTFTDQDGLVSPRLDTYVTGLTRANGTRLNVAPA 551
            LPY    L +   +  V   R LE G        V+ R   +V       G R ++ P 
Sbjct: 409 GLPYKQ--LPYAKFSLDVPLSRWLEVGV---DSSAVAFRKAGFV------EGQREDIYPY 457

Query: 552 VDYPMNWTYGFITPKLKYVYTKYDLDLDSIGKNQIIAQQAAATAANPYAGGDFKSSQDRA 611
           +      +  F+ P+L Y YT Y   LDS  +N     Q  + A +P+     + S  R+
Sbjct: 458 LAADFGSSAWFVRPRLGYRYTAY--QLDSSYQNYGYGGQLGSGATSPFN----QKSPSRS 511

Query: 612 VPVASVDSGLYFDRNTNWFGKDYRQTLEPRAFYLYVPNKDQSDIPVFDTSEYSFSYASLF 671
           +P+ S+DSGL FDR+T  FG  Y QTLEPR +YLYVP + Q ++P+FDT+  SF Y  LF
Sbjct: 512 MPIVSLDSGLVFDRSTTLFGSSYTQTLEPRLYYLYVPYRKQDNLPLFDTNVMSFDYWQLF 571

Query: 672 RDNRFSGSDRIGDENKLSLGLTSRWIEENGFERQRVSVGQAVYFKDREVQLPGILAADRA 731
             N+FSG+DR  D N L+  LTSR +++ G ER   S+GQ  YF  ++V     L  D  
Sbjct: 572 STNQFSGADRQMDANNLTAALTSRLLDDGGVERVSASIGQIHYFSPQKV-----LGTDWV 626

Query: 732 DAQSDVSPVALDYEFRFNRDWRATADYNWDTEEHSPRSGSAMLHYQPEDNPNKIINVGYR 791
                 S      + + +  WR  + Y W          S  L  Q     + ++N  YR
Sbjct: 627 R-----SSYVAQLDVQLSERWRLGSSYQWSPNTRLTDLASVQL--QRRIRTDGVLNFSYR 679

Query: 792 YRNDQVVYNQLTGKWQFGGDYGQPGDPNFVKDYYKIQQHDFSMMWPIIPQWNLITRWQYD 851
           YR                                 ++Q++ S+++P+  +W L+  W Y 
Sbjct: 680 YRRG------------------------------LLEQYNASVVYPVSERWRLVGAWTYS 709

Query: 852 YARNRTLEAFGGFEYDNCCWKLRVINRYWVSNDEYSQIAPLNEKG-----DHGLFFQIVL 906
                +++A  G EYD+CC  LR++ R +V N  Y    P    G     D+ + F++V 
Sbjct: 710 VKDRESVDALAGVEYDSCCVSLRLVGRSYV-NQSYYGFGPAPTGGNINHRDNAVMFEVVF 768

Query: 907 KGLGGLTGAKVESFLDKGIEGYR 929
           KGLG  TG++++  L + I GY+
Sbjct: 769 KGLGS-TGSQIDPLLRRDILGYQ 790