Pairwise Alignments

Query, 936 a.a., LPS biosynthesis protein from Pseudomonas simiae WCS417

Subject, 846 a.a., LPS-assembly protein LptD from Xanthobacter sp. DMC5

 Score =  114 bits (286), Expect = 2e-29
 Identities = 140/574 (24%), Positives = 231/574 (40%), Gaps = 50/574 (8%)

Query: 156 IGAKASRYEQEQQVATLAGDVVMRQGSMQLESEEASLYQAENRGELNGKVRLRD-NGALI 214
           + A    Y+ ++   +  G+V +      LE+    L +  N     G  RL+D +G ++
Sbjct: 86  VTADQLEYDYQKDTVSAVGNVQIYYDGSTLEARRVVLDRKANTLRAEGNARLKDKDGKIV 145

Query: 215 VGDHAEVQLDTGAAQIDNAEYVLHKSRIRGNALYAKRAENAIIRLKDGTYTTCEPDSN-- 272
             D  ++  D     ID+             A+ A R +  I   ++G YT CEP  +  
Sbjct: 146 TADTLQLTQDFKQGFIDSLRLDT-PDNTHFAAVRADRTDGNITVFQNGIYTACEPCKDDP 204

Query: 273 ----AWQLRGNNITLNPATGFGTATNATLRIKNIPILYTPYIYFPIDD-RRQSGFLPPSF 327
                WQ++   I  N         +A +    +P+ Y PY+  P    +R++GFL P F
Sbjct: 205 SKPPLWQIKAKKIIHNDDEKMVYYEDAWVEFFGLPVAYFPYMSSPDPTVKRKTGFLMPEF 264

Query: 328 STGSETGFTLVTPYYFNLAPNYDATLYPQYMTKRGLLMEGEFRYLTKSSEGQFGGAYLND 387
            + S+ G+ +  P+++N+AP+ D TL P ++T++G+LM+ E+R    +       A +  
Sbjct: 265 FSSSQIGYGVSVPFFWNIAPDRDLTLTPAFLTQQGVLMQAEWRQRLINGSYTIRAAGIVQ 324

Query: 388 DNDERSKQTDYEKTRYMLNW-QHRGGLDSRLATQV--------DYTRISDPYYFQDLKSF 438
            N +    T    T  +  + + RG ++S  A  +        D T +SD  + +D    
Sbjct: 325 QNPQDFITTSNGITEVLPGYREDRGAVESTGAFALNKFWTFGWDGTVVSDRTFLRDYNLI 384

Query: 439 QEGVESRDA---LNQQGSVTY---RGDSYQARLNVQAYQL-ATISQITPYDRLPQITFNG 491
            +   ++ +   L  QG  +Y   RG  Y   L V   Q    I     YD++    FN 
Sbjct: 385 PDATTTKTSTVYLTGQGDRSYFDLRG-LYFLGLGVTDDQARQPIVGTLNYDKV----FNN 439

Query: 492 ALPYHPGGLNFTYETEAVRFERSLEKGTFTDQDGLVSPRLDTYVTGLTRANGTRLNVAPA 551
           AL     G      +   +    +     T   G V             A    L  AP 
Sbjct: 440 ALWGGEAGFKVNLTSLTRQQADFIGTSELTSAIGSVGVPTGACTLWSPNAKECLLRGAPG 499

Query: 552 VDY-----PMNWTYGFITPKLKYVYTKY---DLDLDSIGKNQIIAQ-QAAAT--AANPYA 600
            DY      + W    IT  L   +T +    +D+ S+  + + A  Q   T    NP  
Sbjct: 500 -DYTRLSGDVYWK-KTITDPLGQQWTPFVTARVDVASVNTSYLPASYQFGPTFPGQNPLQ 557

Query: 601 GGDFKSSQDRAVPVASVDSGLYFDRNTNWFGKDYRQTLEPRAFYLYVPNKDQ-SDIPVFD 659
            G       RA+P   +D    F    +W      QT+EPRA  +  PN+      P  D
Sbjct: 558 SG--SDDLIRAMPAVGLDYKYPFISAESW----GTQTIEPRAQVIIRPNESNIGKFPNED 611

Query: 660 TSEYSFSYASLFRDNRFSGSDRIGDENKLSLGLT 693
                F   +LF  N++SG DR+   ++L+LG+T
Sbjct: 612 AQSLVFDDTNLFEINKYSGYDRVEGGSRLNLGVT 645