Pairwise Alignments

Query, 936 a.a., LPS biosynthesis protein from Pseudomonas simiae WCS417

Subject, 785 a.a., LPS-assembly protein LptD @ Organic solvent tolerance protein precursor from Variovorax sp. SCN45

 Score =  270 bits (690), Expect = 3e-76
 Identities = 226/788 (28%), Positives = 345/788 (43%), Gaps = 119/788 (15%)

Query: 174 GDVVMRQGSMQLESEEASLYQAENRGELNGKVRLRDNGALIVGDHAEVQLDTGAAQIDNA 233
           GD  +R+G   + ++  +     +     G V L   G +  G    +++++     ++ 
Sbjct: 69  GDASLRRGDTHVTADRLTYQPPGDLATATGNVHLNQGGNVYEGPELHLKVESFEGFFNHV 128

Query: 234 EYVLHKSRIRGNALYAKRAENAIIRLKDGTYTTCEPDSNA-----WQLRGNNITLNPATG 288
            Y L ++   G A      +  +   +  TYTTC  ++ A     W L    +T +  T 
Sbjct: 129 RYTLLETGAHGEAERIDFVDPNVSVARHATYTTCLRENYAGWVPAWMLSAVTLTTDNETN 188

Query: 289 FGTATNATLRIKNIPILYTPYIYFPIDDRRQSGFLPPSFSTGSETGFTLVTPYYFNLAPN 348
             TAT+A +    +     P + FP+++ RQSG LPP     +  GF  + PYY+N+APN
Sbjct: 189 LATATDARISFLGLTTPSLPSVSFPLNNARQSGLLPPVIGFDTTNGFEYLQPYYWNIAPN 248

Query: 349 YDATLYPQYMTKRGLLMEGEFRYLTKSSEGQFGGAYLNDDNDERSKQTDYEKTRYMLNWQ 408
            D TLYP+ M+ RG+ +  EFRYL K   GQ          DE    +  ++ R+ L  +
Sbjct: 249 RDLTLYPEIMSNRGVNLGTEFRYLEKDYSGQIRV-------DEMPSDSLRDRNRWGLWAK 301

Query: 409 HRGGLDSR------LATQVDYTRISDPYYFQDLKSFQEGVESRDALNQQGSVTYRGD-SY 461
           H   LD +      L T  +  R+SD  Y++D  S    + SR   N+      +GD S 
Sbjct: 302 HDQKLDPKPFGLDSLTTSFNINRVSDDDYWRDF-SHTPTLTSRQLTNEADLNWTKGDWSG 360

Query: 462 QAR-LNVQAYQLATISQITP-YDRLPQITFNGALPYHPGGLNFTYETEAVRFERSLEKGT 519
           QAR L+ Q  Q A  S ITP Y+R+PQ+T N    Y   GL+ +   +  RF+       
Sbjct: 361 QARTLSYQTLQYAA-SPITPSYNRVPQVTANYN-KYDWHGLDVSGTLDYTRFQ------- 411

Query: 520 FTDQDGLVSPRLDTYVTGLTRANGTRLNVAPAVDYPMNWTYGFITPKLKYVYTKYDLDLD 579
               D   +P L+    G+ + +G R+     +  P     GF  PKL      Y L   
Sbjct: 412 ---VDSAYAPTLN----GIKQPDGERVVGNLQISRPWVAPGGFFIPKLLLHTASYQL--- 461

Query: 580 SIGKNQIIAQQAAATAANPYAGGDFKSSQDRAVPVASVDSGLYFDRNTNWFGKDYRQTLE 639
                           A+P A G  ++S    VP  S+DSGL F+R+T+ FG  +RQTLE
Sbjct: 462 ----------------ASPLADG--RTSITSVVPTVSLDSGLVFERDTSLFGSAWRQTLE 503

Query: 640 PRAFYLYVPNKDQSDIPVFDTSEYSFSYASLFRDNRFSGSDRIGDENKLSLGLTSRWIEE 699
           PRAFY++ P +DQS +PV+DT+    S+A+L+ +N FSG+DR+ D N L+ G+T+R I+ 
Sbjct: 504 PRAFYVHTPYRDQSQLPVYDTAANDVSFATLYTENAFSGNDRVSDTNTLTTGVTTRLIDP 563

Query: 700 -NGFERQRVSVGQAVYFKDREVQLPGILAADRADAQSDVSPVALDYEFRFNRDWR--ATA 756
             G E  R  + Q   F D+ V LPG  A    D   D     L  +  +N  W     A
Sbjct: 564 VTGAESARFGIAQRFRFSDQNVTLPGGTAV--TDRSGD---FILGGQVHWNPKWSIDGLA 618

Query: 757 DYNWDTEEHSPRSGSAMLHYQPEDNPNKIINVGYRYRNDQVVYNQLTGKWQFGGDYGQPG 816
            YN DT + +    +  L Y P                    Y+ LT  +++  D     
Sbjct: 619 QYNMDTGKST--RDALTLRYTPAQ------------------YHTLTAAFRYQADSTTTA 658

Query: 817 DPNFVKDYYKIQQHDFSMMWPIIP---------------QWNLITRWQYDYARNRTLEAF 861
           +          +  DF+  WP+                 +W  + R  Y        ++ 
Sbjct: 659 NDG-------TKTVDFNWQWPLSDLTGGLMGGKSAADPGRWYAVGRLSYSLHDRALSDSL 711

Query: 862 GGFEYDNCCWKLRVINRYWVSNDEYSQIAPLNEKGDHGLFFQIVLKGLGGLTGAKVESFL 921
            G EY+ CCW  R++    V+              D  L FQI   G G + G+   S L
Sbjct: 712 VGAEYNACCWVGRIVLERLVTG---------RATPDTRLMFQIQFNGFGNI-GSNPTSTL 761

Query: 922 DKGIEGYR 929
            + I+GY+
Sbjct: 762 LQNIQGYQ 769