Pairwise Alignments

Query, 936 a.a., LPS biosynthesis protein from Pseudomonas simiae WCS417

Subject, 754 a.a., LPS-assembly protein LptD @ Organic solvent tolerance protein precursor from Sphingobium sp. HT1-2

 Score = 87.0 bits (214), Expect = 4e-21
 Identities = 66/261 (25%), Positives = 104/261 (39%), Gaps = 14/261 (5%)

Query: 150 SDAPTFIGAKASRYEQEQQVATLAGDVVMRQGSMQLESEEASLYQAENRGELNGKVRLRD 209
           +D      A    Y+   QV T  G+V + +   +L +++    +   + E  G V + D
Sbjct: 56  NDQEIGFAADTLEYDTNSQVVTATGNVQLLRDGNRLRADKIVWDRNTGKVEAQGAVSVID 115

Query: 210 -NGALIVGDHAEVQLDTGAAQIDNAEYVLHKSRIRGNALYAKRAE--NAIIRLKDGTYTT 266
            +G +  GD  +V        +DN   VL K    G  + A + E  N +  L    YT 
Sbjct: 116 PDGNVAYGDRFDVTDTLKDGAVDNILLVLQK----GGRMAATKGERVNGVYTLHHAAYTG 171

Query: 267 CE-------PDSNAWQLRGNNITLNPATGFGTATNATLRIKNIPILYTPYIYFPIDDRRQ 319
           C        P    WQ+    +  +P     + T A + +  +P++  P +  P+ D   
Sbjct: 172 CPVEGSDGCPKEPTWQINAVKVVYDPTKQRVSYTRANVELFGLPLIPVPGLSHPVGDDGG 231

Query: 320 SGFLPPSFSTGSETGFTLVTPYYFNLAPNYDATLYPQYMTKRGLLMEGEFRYLTKSSEGQ 379
           SG L P+       GF +  PYY  LAPN D T+ P   +    ++EG FR+L      Q
Sbjct: 232 SGLLVPNIRYDRVNGFEVAVPYYLKLAPNRDLTVTPHVYSDSLPMIEGNFRHLYDRGAYQ 291

Query: 380 FGGAYLNDDNDERSKQTDYEK 400
             G             TD +K
Sbjct: 292 ITGYATYGSRSSGITPTDSQK 312



 Score = 33.9 bits (76), Expect = 4e-05
 Identities = 17/57 (29%), Positives = 28/57 (49%)

Query: 636 QTLEPRAFYLYVPNKDQSDIPVFDTSEYSFSYASLFRDNRFSGSDRIGDENKLSLGL 692
           Q + PR   +  P+     +P  D        ++LF  NRF+G DR  D ++++ GL
Sbjct: 505 QRIAPRVQIVASPHLANLSVPNEDARSVDLEDSNLFALNRFAGYDRFEDSSRITYGL 561