Pairwise Alignments

Query, 936 a.a., LPS biosynthesis protein from Pseudomonas simiae WCS417

Subject, 940 a.a., LPS-assembly protein LptD from Pseudomonas putida KT2440

 Score = 1457 bits (3772), Expect = 0.0
 Identities = 696/949 (73%), Positives = 793/949 (83%), Gaps = 22/949 (2%)

Query: 1   MALKSPAFRRKFPLLVTGSLLALQPFATSFVVAAEQYDCSVSASGAWDCAPKTAAAPLPP 60
           MALKSPAFRRKFPLLVTG LLALQP ATS+VVAAEQ+DC VSA+G WDC PKT    LPP
Sbjct: 1   MALKSPAFRRKFPLLVTGGLLALQPLATSYVVAAEQFDCQVSAAGGWDCKPKTPVNNLPP 60

Query: 61  RPVHDGAAISSANSTAQTDAGGKAEAEPKTALVTESKGRGLRSRSADYSHLDWVPREKLT 120
           RPVH+GAA+SS      T+A G+AE   +  LVTE+KGRGL+SRS DYSHLDWVPREKLT
Sbjct: 61  RPVHEGAAVSSG-----TEAAGEAETADRPVLVTEAKGRGLKSRSEDYSHLDWVPREKLT 115

Query: 121 AAQLAETGPYCGGAYIEPTRPGMNDKTNKSDAPTFIGAKASRYEQEQQVATLAGDVVMRQ 180
           AAQLAETGPYCGGAYIEPTRPGM D T K ++PT+I AK S+Y+QEQQ+ATLAGDVVMRQ
Sbjct: 116 AAQLAETGPYCGGAYIEPTRPGMADTTPKDESPTYINAKVSKYQQEQQIATLAGDVVMRQ 175

Query: 181 GSMQLESEEASLYQAENRGELNGKVRLRDNGALIVGDHAEVQLDTGAAQIDNAEYVLHKS 240
           GSMQ E++EA+LYQAENRGEL G V++RDNG+L+VGD A++QLDTG AQ+DNAEYV+HKS
Sbjct: 176 GSMQAEADEANLYQAENRGELKGNVKIRDNGSLVVGDEAQIQLDTGEAQVDNAEYVMHKS 235

Query: 241 RIRGNALYAKRAENAIIRLKDGTYTTCEPDSNAWQLRGNNITLNPATGFGTATNATLRIK 300
            IRG+ALYAKR ENAIIRLKDGTYTTCEP SNAWQL+GNNITLNPATGFGTATN TLR+K
Sbjct: 236 HIRGSALYAKRGENAIIRLKDGTYTTCEPGSNAWQLKGNNITLNPATGFGTATNVTLRVK 295

Query: 301 NIPILYTPYIYFPIDDRRQSGFLPPSFSTGSETGFTLVTPYYFNLAPNYDATLYPQYMTK 360
           + P+ YTPYIYFPIDDRRQSGFLPPSFST S+TGF LVTPYYFNLAPNYDATLYP+YM K
Sbjct: 296 DFPVFYTPYIYFPIDDRRQSGFLPPSFSTSSDTGFMLVTPYYFNLAPNYDATLYPRYMAK 355

Query: 361 RGLLMEGEFRYLTKSSEGQFGGAYLNDDNDERSKQTDYEKTRYMLNWQHRGGLDSRLATQ 420
           RGLLMEGEFRYLT SSEGQFGGAYLND ND+R  QTDY+  R+M+NWQH+GGLD RL T+
Sbjct: 356 RGLLMEGEFRYLTPSSEGQFGGAYLNDKNDDRKDQTDYKDQRWMVNWQHKGGLDERLMTE 415

Query: 421 VDYTRISDPYYFQDLKSFQEGVESRDALNQQGSVTYRGDSYQARLNVQAYQLATISQITP 480
           VDYT ISDP+YFQDL+S Q GVESRD LNQQG++TYRGDSY ARLNV AY++ATISQITP
Sbjct: 416 VDYTDISDPFYFQDLESDQIGVESRDLLNQQGALTYRGDSYTARLNVHAYEMATISQITP 475

Query: 481 YDRLPQITFNGALPYHPGGLNFTYETEAVRFERSLEKGTFTDQ------------DGLVS 528
           YDRLPQ+T NG LP+ PGGLN  YETEAVRF+R L+     D+            DG+  
Sbjct: 476 YDRLPQLTLNGTLPFQPGGLNLGYETEAVRFDRDLKDSAVFDEDGNPDLTAGLKPDGIGG 535

Query: 529 PRLDTYVTGLTRANGTRLNVAPAVDYPMNWTYGFITPKLKYVYTKYDLDLDSIGKNQIIA 588
            RLD  + G+ RANGTRLNVAP++  PM  +YG+ITPKLKY+YT YDLDLDS GK  I  
Sbjct: 536 RRLDENIFGVARANGTRLNVAPSISLPMEASYGYITPKLKYMYTHYDLDLDSKGKGDI-- 593

Query: 589 QQAAATAANPYAGGDFKSSQDRAVPVASVDSGLYFDRNTNWFGKDYRQTLEPRAFYLYVP 648
             A A A      GD+KS+ +R +P+ SVDSGLYFDRNT+ FG +YRQTLEPR FYLYVP
Sbjct: 594 --AGANADTLDVFGDYKSNLNRDIPIFSVDSGLYFDRNTSLFGTNYRQTLEPRMFYLYVP 651

Query: 649 NKDQSDIPVFDTSEYSFSYASLFRDNRFSGSDRIGDENKLSLGLTSRWIEENGFERQRVS 708
            KDQ DIP+FDT E  FSY SLFRDNRFSG+DRIGDENKLSLG+T+RWIEENGFERQ  S
Sbjct: 652 YKDQMDIPLFDTGETLFSYDSLFRDNRFSGTDRIGDENKLSLGVTTRWIEENGFERQNFS 711

Query: 709 VGQAVYFKDREVQLPGILAADRADAQSDVSPVALDYEFRFNRDWRATADYNWDTEEHSPR 768
           +GQA YFKDR+VQLPGI    R DAQSDVSP AL Y + FNRDWR  +D+NWD +  S R
Sbjct: 712 IGQAYYFKDRKVQLPGIDYRTRKDAQSDVSPYALVYNYYFNRDWRFNSDFNWDPDSRSTR 771

Query: 769 SGSAMLHYQPEDNPNKIINVGYRYRNDQVVYNQLTGKWQF-GGDYGQPGDPNFVKDYYKI 827
           SGSAM HYQPEDNPNKI+N+GYRYRND + Y+  TG W+  GGDYG PGDPN++KDYYKI
Sbjct: 772 SGSAMFHYQPEDNPNKIVNLGYRYRNDTIAYDSTTGTWKVGGGDYGTPGDPNYIKDYYKI 831

Query: 828 QQHDFSMMWPIIPQWNLITRWQYDYARNRTLEAFGGFEYDNCCWKLRVINRYWVSNDEYS 887
           QQHDFS++WPI+PQWN+I RWQ+DY RNRTLEA GGFEYDNCCWKLR+INRYW+  D++S
Sbjct: 832 QQHDFSVIWPIVPQWNVIARWQHDYNRNRTLEAMGGFEYDNCCWKLRLINRYWIDYDDFS 891

Query: 888 QIAPLNEKGDHGLFFQIVLKGLGGLTGAKVESFLDKGIEGYREREDQAF 936
           Q  P NEKGDHG+F QIVLKGLGG+ G KVESFLD+GI+GYREREDQA+
Sbjct: 892 QALPQNEKGDHGVFLQIVLKGLGGVVGNKVESFLDQGIQGYREREDQAY 940