Pairwise Alignments

Query, 936 a.a., LPS biosynthesis protein from Pseudomonas simiae WCS417

Subject, 791 a.a., LPS assembly protein LptD from Dickeya dianthicola ME23

 Score =  308 bits (789), Expect = 9e-88
 Identities = 234/827 (28%), Positives = 376/827 (45%), Gaps = 82/827 (9%)

Query: 124 LAETGPYCGGAYIEPTRPGMNDKTNKSDAPTFIGAKASRYEQEQQVATLAGDVVMRQGSM 183
           LA+    C        RP +   TN+   P  I A  S+       A   G+V + QG+ 
Sbjct: 23  LADLASQCMSGVPVYNRPLVTGDTNQ--LPVHIKADQSQANYPDS-AVFTGNVNVEQGNR 79

Query: 184 QLESEEASLYQAENRGELN--------GKVRLRDNGALIVGDHAEVQLDTGAAQIDNAEY 235
            L +++  L Q    G+ +        G V   DN  ++ G  A   L+T    ++N +Y
Sbjct: 80  VLTADQVQLNQKPQPGQTDPIRTVTAIGNVHYDDNQVILKGPRAWSNLNTKDTDVENGDY 139

Query: 236 VLHKSRIRGNALYAKRAENAIIRLKD-GTYTTCEPDSNAWQLRGNNITLNPATGFGTATN 294
           ++   + RG+A   K+ EN    + D G++T+C P  ++W + G+ +  +         N
Sbjct: 140 LMVGRQGRGDADKMKQRENNRYTILDNGSFTSCLPGDDSWSVVGSEVIQDRQEEVAEIWN 199

Query: 295 ATLRIKNIPILYTPYIYFPIDDRRQSGFLPPSFSTGSETGFTLVTPYYFNLAPNYDATLY 354
           A   I  +P+ Y+PY+  PI D+R+SGFL PS   G+  GF LVTPYY+N+APNYDAT+ 
Sbjct: 200 ARFHIAGVPVFYSPYMQMPIGDKRRSGFLIPSAKYGNRNGFELVTPYYWNIAPNYDATIT 259

Query: 355 PQYMTKRGLLMEGEFRYLTKSSEGQFGGAYLNDD----NDERSKQTDY----EKTRYMLN 406
           P   T RG   + EFR+L++         +L +D    ND  S ++ Y       R++ +
Sbjct: 260 PHVQTNRGTQWQNEFRHLSRFGFSVVEFDWLQNDKQYKNDVLSGKSGYAADENYNRWLFH 319

Query: 407 WQHRGGLDSRLATQVDYTRISDPYYFQDLKSFQEGVESRDALNQQGSVTYRGDSYQARLN 466
           W H G +D      VDYT++SD  YF DL S   G  +     Q+ S+ Y   ++ A L+
Sbjct: 320 WMHSGVVDQVWRINVDYTKVSDQNYFTDLDSVY-GNTTDGYATQKFSLGYATRNWDATLS 378

Query: 467 VQAYQL-ATISQITPYDRLPQITFNGALPYHPGGLNFTYETEAVRFERSLEKGTFTDQDG 525
            + YQ+ + ++    Y  +PQ+  N A   + G  +     +A +F              
Sbjct: 379 TRQYQIFSNLANRDVYRAMPQLDINFA-QNNIGPFDLYLYGQAAKFTN------------ 425

Query: 526 LVSPRLDTYVTGLTRANGTRLNVAPAVDYPMNWTYGFITPKLKYVYTKYDLD-LDSIGKN 584
            V+P         T  + TR ++ P +  P++  +  ++ + K + T Y  + LD+   N
Sbjct: 426 -VNP---------TYPDATRFHIEPTLSLPLSNGWASLSTETKLMATHYQQENLDTYRDN 475

Query: 585 QIIAQQAAATAANPYAGGDFKSSQDRAVPVASVDSGLYFDRNTNWFGKDYRQTLEPRAFY 644
              A    AT+         K S +R +P    D  L F+R+ +W  K Y QTLEPRA Y
Sbjct: 476 H--ADNTDATS--------LKGSVNRVMPQFKTDGKLVFERDMDW-AKGYTQTLEPRAQY 524

Query: 645 LYVPNKDQSDIPVFDTSEYSFSYASLFRDNRFSGSDRIGDENKLSLGLTSRWIEENGFER 704
           LYVP +DQS I  +D++     YA LFR+  FSG DRI   N++S G+T+R  + +  ER
Sbjct: 525 LYVPYRDQSSIRAYDSTLLQADYAGLFRERTFSGLDRIASANQVSTGVTTRLYDSSLEER 584

Query: 705 QRVSVGQAVYFKDREVQLPGILAADRADAQSDVSPVALDYEFRFNRDWRATADYNWDTEE 764
              S+GQ  YF+         +  D++D +  +S  A D  ++F  +W       +D   
Sbjct: 585 FNASLGQIYYFERPRTGTASTI--DQSDNRGSLS-WAGDSYWKFADNWGIRGGAQYDQRL 641

Query: 765 HSPRSGSAMLHYQPEDNPNKIINVGYRYRNDQVVYNQLTGKWQFGGDYGQPGDPNFVKDY 824
                G A+L Y+      +++ + YR+ + + +   L      G   G           
Sbjct: 642 KDFTLGDAVLEYR--GGGERMLQLNYRFASSKYIQAMLPTVTNPGFQQG----------- 688

Query: 825 YKIQQHDFSMMWPIIPQWNLITRWQYDYARNRTLEAFGGFEYDNCCWKLRV--INRYWVS 882
             I Q   +  WP+  +W ++  + YD   N+  +   G +Y  CCW + V    +  + 
Sbjct: 689 --ISQIGATASWPLTDRWAIVGAYYYDTKANQPADQLLGLQYSTCCWAVNVGYERKITIW 746

Query: 883 NDEYSQIAPLNEKGDHGLFFQIVLKGLGGLTGAKVESFLDKGIEGYR 929
           N   +Q    N+ G     F   L+GL        E  L  GI  Y+
Sbjct: 747 NSTTNQSVYDNKLG-----FSFELRGLSSNYSLGTEKMLKTGILPYQ 788