Pairwise Alignments

Query, 936 a.a., LPS biosynthesis protein from Pseudomonas simiae WCS417

Subject, 816 a.a., LPS-assembly protein LptD from Acinetobacter radioresistens SK82

 Score =  341 bits (875), Expect = 1e-97
 Identities = 253/827 (30%), Positives = 385/827 (46%), Gaps = 101/827 (12%)

Query: 115 PREKLTAAQLAETGPYCGGAYIEPTRPGMNDKTNKSDAPTFIGAKASRYEQEQQVATLAG 174
           P  +L   Q A +  +C G +I P  P  N      D  T +      Y   Q  +TL G
Sbjct: 68  PEAQLRNTQ-ALSSAFCQGTWITPVSPDNN--APDPDKVTSVITADYGYYNPQGDSTLEG 124

Query: 175 DVVMRQGSMQLESEEASLYQAENRGELNGKVRLRDNGALIVGDHAEVQLDTGAAQIDNAE 234
           +VV+ Q    + +++ +L Q +      G+V+L   G L   D     L T    ++N+ 
Sbjct: 125 NVVIDQEGRSIRADKVTLDQTQTYANAQGRVQLAQGGLLAQSDQINYNLKTQTGDLNNSF 184

Query: 235 YVLHKSRIRGNALYAKRAENAIIRLKDGTYTTCEP-DSNAWQLRGNNITLNPATGFGTAT 293
           Y+  +    G+A   +R    +  L + +YTTC P ++ AW+L+ + I LN  TG G  T
Sbjct: 185 YIAEQQHAHGHAEKIERTSPTVAILSNASYTTCPPGEAPAWRLQADRIELNQETGRGVTT 244

Query: 294 NATLRIKNIPILYTPYIYFPIDDRRQSGFLPPSFSTGSETGFTLVTPYYFNLAPNYDATL 353
              L +KN P+L  PY  FPIDDRR +G L P F   ++ G  L  P Y NLAPNYDAT+
Sbjct: 245 GTKLYVKNTPVLAVPYFNFPIDDRRTTGILNPQFGFSNDGGLELSVPVYLNLAPNYDATI 304

Query: 354 YPQYMTKRGLLMEGEFRYLTKS-SEGQFGGAYLNDDNDERSKQTDYEKTRYMLNWQHRGG 412
            P+Y+  RG + EGEFRYLT++  EG+  G YL  D +   +  D ++  ++ +W     
Sbjct: 305 TPRYLADRGPMAEGEFRYLTENFGEGRVWGGYLPSDKEYNDE--DRKEFHFLHDWV---- 358

Query: 413 LDSRLATQVDYTRISDPYYFQDLKSFQEGVESRDALNQQGS--VTYRGD--SYQARLNVQ 468
           ++   +T ++Y  +SD  YF DL S      S+  LNQ+ +  + YR      +A+L V+
Sbjct: 359 INPYWSTNLEYNYVSDKDYFADLDS---SPNSKTDLNQRRAWVINYRNQIPGLKAQLKVE 415

Query: 469 AYQLA---TISQITPYDRLPQITFNGALPYHPGGLNFTYETEAVRFERSLEKGTFTDQDG 525
            +Q        +  PY RLPQ   N  +  +P GL + +  +   F++S+      D D 
Sbjct: 416 DFQTLDKDIKDEDRPYARLPQFLLN-YVGGNPQGLQYEFNNDTGYFKKSIN----DDSDV 470

Query: 526 LVSPRLDTYVTGLTRANGTRLNVAPAVDYPMNWTYGFITPKLKYVYTKYDLDLDSIGKNQ 585
           L S             +GTR+    AV Y     + F+ P++ +       D DS     
Sbjct: 471 LES-------------SGTRIYNQFAVRYNYRNPWSFVIPEVSFRSINTFYDRDSREDRG 517

Query: 586 IIAQQAAATAANPYAGGDFKSSQDRAVPVASVDSGLYFDRNTNWFGKDYRQTLEPRAFYL 645
           I A     +                AVP  ++D+GL F++        + Q++ PR FY 
Sbjct: 518 IEADSLTKSV---------------AVPQFTLDTGLLFEKEGT-----FLQSISPRLFYA 557

Query: 646 YVPNKDQSDIPVFDTSEYSFSYASLFRDNRFSGSDRIGDENKLSLGLTSRWIEENGFERQ 705
           Y P KDQ+D P FDT+  S SY  LF   RF G DR+ D N LSLG+T   +++ G ER 
Sbjct: 558 YAPYKDQNDYPNFDTTTASISYDQLFNPYRFYGHDRLEDNNFLSLGVTYSLMDQIGLERL 617

Query: 706 RVSVGQAVYFKDREVQLPGILAADRADAQSDVSPVALDYEFRFNRDWRATADYNW-DTEE 764
           R SVGQ+ +F+DR V L      D  D +    PV L    + N+++  +A+  W    E
Sbjct: 618 RASVGQSYFFEDRRVTL---YNEDELDQEKRTGPV-LSLSSQLNQNFTISANSAWMSNGE 673

Query: 765 HSPRSGSAMLHYQPEDNPNKIINVGYRYRNDQVVYNQLTGKWQFGGDYGQPGDPNFVKDY 824
           +S R     ++Y    N   + N+GY YR D                      PN    Y
Sbjct: 674 NSQR--DFQVYY--TGNQGNLYNLGYFYRKD---------------------IPNRQDSY 708

Query: 825 YKIQQHDFSMMWPIIPQWNLITRWQYDYARNRTLEAFGGFEYDNCCWKLRVINRYWVSND 884
            ++     S + P+   W ++   QYD  ++   E   G  Y++CCW + V  R +    
Sbjct: 709 DQVVA---SFIQPVYNNWRIMGHVQYDIDQDVAREYLLGVNYESCCWGVSVYGRSY---- 761

Query: 885 EYSQIAPLNEKG---DHGLFFQIVLKGLGGLTGAKVESFLDKGIEGY 928
            Y+ +  +NE G      +  +  LKGLGGL   K+ S L+  + G+
Sbjct: 762 -YNDLDDINEPGVKPKRAVMAEFTLKGLGGLNN-KLASLLESRVLGF 806