Pairwise Alignments

Query, 664 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 795 a.a., Sensory box histidine kinase from Pseudomonas putida KT2440

 Score =  590 bits (1520), Expect = e-172
 Identities = 300/457 (65%), Positives = 355/457 (77%), Gaps = 1/457 (0%)

Query: 4   RCLLVIGCLCLALMANAAPAPVAPQAQLNAQQREWLAQHPELRVGLVLQAPFAQYDRRLQ 63
           R LLVIGCL L L+A A P  + P   L   Q++WL  H  LRVGLVLQAP+AQ+DRRLQ
Sbjct: 5   RRLLVIGCLWLPLIAWAKPEAL-PSVVLEPDQQQWLDTHRSLRVGLVLQAPYAQFDRRLQ 63

Query: 64  RLSGANVELMQWLAKALNIELTWRNFPNQEQLEAALSDGEVDIAPGLQQTPAGLRLWLFS 123
           +L GANVEL+  LA+ L ++LTWRNF +Q  LE AL  GE+D APGL QTPA LRLWLFS
Sbjct: 64  QLYGANVELVNSLAQTLRLDLTWRNFTDQGSLEHALQSGEIDFAPGLTQTPASLRLWLFS 123

Query: 124 DPYMRVPQHIVGIRDGGGAVELEKLDEQSRVAVRMPSAVADYLRSTYPGLNLQGVPMERQ 183
           DPYMRVPQ +VG R G  AVELEKL+ + RVAVRMPS +ADYLR  Y  LNLQGVP +R+
Sbjct: 124 DPYMRVPQLVVGPRTGAMAVELEKLEAEQRVAVRMPSPLADYLRGNYGNLNLQGVPDDRE 183

Query: 184 ALQLLVSQQARYAVVDEAQLSRLSGEAEFAGLAVVGDIGLPQLLRVATRREWPELASIME 243
           ALQL+V  QA +AV+DEAQLSRLS E+EF  LAVVGDIGLPQLLR+ +RR+WP LA ++E
Sbjct: 184 ALQLVVGGQASFAVLDEAQLSRLSRESEFGELAVVGDIGLPQLLRIGSRRDWPMLADVLE 243

Query: 244 SALRAIPARDLDQLHSRWLQPKYPRLTESPGLWQNLSLLLGLLLLASLAAVFWLRRQQRV 303
             L+A+PA++L+QLH RWLQPKYPRL+ESPG WQN++LL GLLLL +LA + W RRQQR 
Sbjct: 244 RGLQAVPAKELEQLHQRWLQPKYPRLSESPGFWQNMALLFGLLLLCALATLVWQRRQQRQ 303

Query: 304 LEHNLLAAREESAARAAGAEALRLTQFSIDQSTVGILWVNWDSHVRYANRAAESMLGYGP 363
           LE +LLAARE    R    EALRL+QF+IDQSTVGILWVNWDSHVRYAN AAE MLGY  
Sbjct: 304 LERSLLAARESLVERQVREEALRLSQFAIDQSTVGILWVNWDSHVRYANHAAERMLGYSE 363

Query: 364 GALIERPLVALDPSLDMDRWLNLWKRARASEDGPQNFATDCRRADGSILPTNVSLSFLRF 423
           GAL+ERPL   +PSL+MDRWL LWK AR    G   F T CRRAD S+LP  +SLSFLRF
Sbjct: 364 GALLERPLSDFEPSLNMDRWLELWKGARTGAGGVGQFETQCRRADQSLLPVELSLSFLRF 423

Query: 424 AEAEYLVVYLNDVTELRRTLAALLQSEAQLRELSAHL 460
            ++EYLVVYL DVTE  R LAAL +SEA+L+ ++ ++
Sbjct: 424 RDSEYLVVYLADVTERHRALAALRESEARLKGIAGNV 460



 Score =  363 bits (931), Expect = e-104
 Identities = 213/376 (56%), Positives = 256/376 (68%), Gaps = 38/376 (10%)

Query: 306 HNLLAAREESAARAAG-AEALRLTQFSIDQSTVGILWVNWDSHVRYANRAAESMLGYGPG 364
           H  LAA  ES AR  G A  +    F +++          D    Y +  +E+++GY P 
Sbjct: 440 HRALAALRESEARLKGIAGNVPGLVFRLERDPA-----EGDLEFPYISEGSEALVGYAPS 494

Query: 365 ALIE-----RPLVALDPSLDMDRWLNL---------WKRARASEDGPQNFATDCRRADGS 410
            +       R LV  +   D  R  +L         W+    +  G Q +A         
Sbjct: 495 EIQHPQMGLRNLVHPEDRADYHRVQDLALASDQDWSWQGRILTRQGEQRWA--------- 545

Query: 411 ILPTNVSLSFLRFAEAEYL---VVYLNDVTELRRTLAALLQSEAQLRELSAHLETVREEE 467
               ++  S       + +   VV+  D+T+ +R   AL +S+ QLRELSAHLE+VREEE
Sbjct: 546 ----DIKASARHLGNGQVVWDGVVW--DITQGKRAELALAKSQEQLRELSAHLESVREEE 599

Query: 468 KARIAREVHDELGQMLTVLKLETSMCELAYAQLDPGLHERLNSMKRLIAQLFQLVRDVAT 527
           KARIAREVHDELGQMLTVLKLE SMCELAYA+LDPGL++RL SMKRLIAQLFQLVRDVAT
Sbjct: 600 KARIAREVHDELGQMLTVLKLEVSMCELAYAELDPGLNDRLASMKRLIAQLFQLVRDVAT 659

Query: 528 ALRPPILDAGIASAIEWQARRFEARTQIPCLVQVPDNLPTLSDAKAIGLFRILQEALTNV 587
           ALRPPILDAGIASAIEWQARRFEARTQIPCLVQVPDNLP LSDAKA GLFRILQEALTNV
Sbjct: 660 ALRPPILDAGIASAIEWQARRFEARTQIPCLVQVPDNLPALSDAKATGLFRILQEALTNV 719

Query: 588 MRHAQAHTVELTLALEGTDLRLTISDDGVGFVQAQGRPVSFGLVGMRERVLIMGGQLSLD 647
           MRHAQAH+VE+ L  EG  LR+T+SDDG GF + Q RP SFGLVG+RERVL++GG ++L+
Sbjct: 720 MRHAQAHSVEIELVREGGQLRMTVSDDGQGFCREQTRPTSFGLVGVRERVLMLGGSMTLE 779

Query: 648 SELGEGTTLSVTVPLD 663
           SE GEGT+LSV +PL+
Sbjct: 780 SEPGEGTSLSVAIPLE 795