Pairwise Alignments

Query, 209 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 196 a.a., DNA-binding response regulator in two-component regulatory system wtih UhpB (NCBI) from Escherichia coli BW25113

 Score =  135 bits (339), Expect = 7e-37
 Identities = 79/201 (39%), Positives = 116/201 (57%), Gaps = 11/201 (5%)

Query: 1   MIRVLVAEDHTIVREGIKQLIGLAKDLLVVGEASNGEQLLEALRHVPCEVVLLDISMPGV 60
           MI V + +DH IVR G  QL+GL  DL VV E  +G + L  L     +V + DISMP +
Sbjct: 1   MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60

Query: 61  NGLEAIARIRALNNPPAILVLSMHDEAQMAARALKVGAAGYATKDSDPALLLTAIRKVAA 120
           +GLE +++   L    A ++LS+HD   +  +AL  GA G+ +K   P  L+ A+  VA 
Sbjct: 61  SGLELLSQ---LPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117

Query: 121 GGRYIDPDLADRMVFEVGLTDARPLHSLLSEREFSVFERLAQGANVNDIAQQLALSSKTI 180
           GG Y+ PD+A ++        A      L++RE  V E+LAQG  V +IA +L LS KT+
Sbjct: 118 GGCYLTPDIAIKL--------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169

Query: 181 STHKARLMQKLNITSLAELVK 201
             H+A LM+KL +++  EL +
Sbjct: 170 HVHRANLMEKLGVSNDVELAR 190